G435177


Basic Information

Item Value
gene id G435177
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 71066540 ~ 71067820 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU492701
TCTACAGATAACAGGGTTGTGTTATTCTCAACACACTCAGTtttcaccacaaaacaccagataatggccccccaaaaataaaggaacagtttcaccatattaaagggaaaatccactcaaacttttttattttttatttgaatgaATCACTGATAacgtaaaataaatatttttttagaaATGCAAAGCAACTAAATAagtagggctttacaatgatggtaaaACTTGGGGAAATATTcaggttaagtgggttaaaatcatCTTAGAGGGTgcagagggacatgtcaaaatgcttaTTTTCGGTGCAATCTGATTTTATAGAATTTtacatgtggtctatattaaagggcacttcatttaatattaTAGGCTTTAGAATttaatattggtgcacaatttctacttagaATATCAAAGGGTCACAAAAGGTACTCTTTTCGTGGAACAACCCAGATATGAAATAGCTGCCAGGATGACATGAAATAGCTTTCAAATCTAGTTGTTTTCAAAGCCACAAATTGTTTCTGTTTGCCTTTCACTAATCATTGCCTATCATTTGAATCATGTTTTTCTTTAATTTGTTAGTCTTTTCCCCCTCTCTTACTAACCACTTGTTAATGTTTGTATACATTTCCATCATATTACTGGTAATAGGGCAGGCGAGAGAACCTCACGGACTGAATGCAACTGCTTTTGCTCTCTGTATCCTCTTTAGCTTTTGGGGCCTTTTAGCCCACAATAATGGAAATGTCTGAGTCAAGAGGGTCATTGAGACAACCATTTTAAACTTGCTATCAATGACAGTGACATTATGCACATCAGCATACATATTTATCAGAATATTGCCGAGATACATAATCATGGGATTTTATATGGTTACTATTTTTAGCCGTTACATACCTCTCAGTAGCTTGAAATGGGAGACACTTGTCCAAGAAGTCAGTGGAGCTTGCTATTTATTTGCATGGTACCAATATTCGTAATTATATCTGGCACTACTATTGATCATGGTCAGCATTGGTCATATCTGATGGATTGTACTTGTTTGCTACTCAGTTTTGATATAAATGCAGCATCTTGTTCAGATTGAAATGTGACAATCTCAATCAGTTTATGAAGGCAATATGGATACATCTCTACAAGGACACTGATGTAAAGTCAGCCGTTTGTTTCTCTTGATCATGTTCATTGAAGAAAAAAGGTATGTTATTGTACTCCTGTCAGTGAAATGGTTGATGTTTAAAGCAAATTCTATTTATggaataaatgtttttaaaaagc

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU492701 True 1281 lncRNA 0.35 1 71066540 71067820

Neighbor

gene id symbol gene type direction distance location
LOC110524468 LOC106613935 coding downstream 8759 71046042 ~ 71057781 (-)
LOC110524467 zmat3 coding downstream 32963 71021672 ~ 71033577 (-)
LOC110524463 tbl1xr1 coding downstream 196143 70836815 ~ 70870397 (-)
LOC110524459 spata16 coding downstream 1061823 69950204 ~ 70004717 (-)
LOC110522884 LOC106604339 coding downstream 1145446 69920157 ~ 69921094 (-)
LOC110524470 LOC106613933 coding upstream 1545 71069365 ~ 71106201 (-)
LOC110524473 LOC106613938 coding upstream 95499 71163319 ~ 71177625 (-)
LOC110524474 LOC106613939 coding upstream 126954 71194774 ~ 71199198 (-)
LOC110524475 LOC106613941 coding upstream 131399 71199219 ~ 71209549 (-)
LOC110524476 LOC106613943 coding upstream 145893 71213713 ~ 71219951 (-)
G435182 NA non-coding downstream 46917 71017404 ~ 71019623 (-)
G435246 LOC106613930 non-coding downstream 55937 71006234 ~ 71010603 (-)
G435244 NA non-coding downstream 62071 71004249 ~ 71004469 (-)
G435243 NA non-coding downstream 62592 71003677 ~ 71003948 (-)
G435240 NA non-coding downstream 67448 70998782 ~ 70999092 (-)
G435282 ycu9 non-coding upstream 44979 71112799 ~ 71114579 (-)
G435280 impact non-coding upstream 47452 71115272 ~ 71126065 (-)
G435283 NA non-coding upstream 48014 71115834 ~ 71116092 (-)
G435291 NA non-coding upstream 63658 71131478 ~ 71131685 (-)
G435305 LOC106584301 non-coding upstream 80946 71148766 ~ 71149086 (-)
G435234 NA other downstream 74742 70990892 ~ 70991798 (-)
G433683 LOC106613912 other downstream 1541750 69486406 ~ 69524790 (-)
G432513 NA other downstream 2060434 69004619 ~ 69006106 (-)
G432338 NA other downstream 2311483 68748558 ~ 68755057 (-)
G432310 LOC106613894 other downstream 2359092 68699821 ~ 68707448 (-)
G435176 NA other upstream 205 71068025 ~ 71068887 (-)
LOC110524478 LOC106613944 other upstream 161362 71226012 ~ 71242283 (-)
il23r LOC106613945 other upstream 218570 71285725 ~ 71308015 (-)
G436172 LOC100136696 other upstream 973142 72040962 ~ 72121697 (-)
G436830 LOC106605384 other upstream 1520464 72588284 ~ 72588576 (-)

Expression


Co-expression Network