G435282 (ycu9)


Basic Information

Item Value
gene id G435282
gene name ycu9
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 71112799 ~ 71114579 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU492829
cccttgtaaaactgaccatcctaccaatcctcgactttggcgatgtcatttacaaaatagcctccaataccctactcaacaaattggatgcagtctatcacagtgcaatccgttttgtcaccaaagccccatatactacccaccattgcgacctgtacgctctcgttggctggccctcgcttccttttttgcctttacctcccttctcacctcatttgctcacattgtatatagacttgtttatactgtattattgactgtatgtttgttttactccatgtgtaactctgtgtcgttgtatctgtcgaactgctttgctttatcttggccaggtcgcaattgtaaatgagaacttgttctcaacttgcctacctggttaaataaaggtaaaataaataaataaataaagagagatATAAACCCACTGTGAATATTACAACTTGTTATGTATATTCAAAACTGGATGCTCTACCTGTATGCATAAATATTGTGAGTGGCGCTTGCAATCTTCTTGTTTTCAAACAGCTTGTCAAGAACCATTCTAACCTGTCTAGGTGTTACCACAGGGGCTAAGTGTGGTTGGAAGGTGCTGCGTCTTTCTGTTATCGTCTCCCCCAGTTTTATAGGAGGTAGTTCCTCATCACTTGAGTGATTTTCAAAGAGGTGTATATTCTCTTTGTTCAGCTTCAGATTGCGGTAATCAGGAATTTCTACATCCTccaccacttcctcctcctctgttgtcataTTTCTCACCTCTGGTTGCTCCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU492829 True 770 lncRNA 0.41 3 71112799 71114579

Neighbor

gene id symbol gene type direction distance location
LOC110524470 LOC106613933 coding downstream 6598 71069365 ~ 71106201 (-)
LOC110524468 LOC106613935 coding downstream 55018 71046042 ~ 71057781 (-)
LOC110524467 zmat3 coding downstream 79222 71021672 ~ 71033577 (-)
LOC110524463 tbl1xr1 coding downstream 242402 70836815 ~ 70870397 (-)
LOC110524459 spata16 coding downstream 1108082 69950204 ~ 70004717 (-)
LOC110524473 LOC106613938 coding upstream 48740 71163319 ~ 71177625 (-)
LOC110524474 LOC106613939 coding upstream 80195 71194774 ~ 71199198 (-)
LOC110524475 LOC106613941 coding upstream 84640 71199219 ~ 71209549 (-)
LOC110524476 LOC106613943 coding upstream 99134 71213713 ~ 71219951 (-)
LOC110524478 LOC106613944 coding upstream 111433 71226012 ~ 71242283 (-)
G435177 NA non-coding downstream 44979 71066540 ~ 71067820 (-)
G435182 NA non-coding downstream 93176 71017404 ~ 71019623 (-)
G435246 LOC106613930 non-coding downstream 102196 71006234 ~ 71010603 (-)
G435244 NA non-coding downstream 108330 71004249 ~ 71004469 (-)
G435243 NA non-coding downstream 108851 71003677 ~ 71003948 (-)
G435280 impact non-coding upstream 693 71115272 ~ 71126065 (-)
G435283 NA non-coding upstream 1255 71115834 ~ 71116092 (-)
G435291 NA non-coding upstream 16899 71131478 ~ 71131685 (-)
G435305 LOC106584301 non-coding upstream 34187 71148766 ~ 71149086 (-)
G435306 NA non-coding upstream 34797 71149376 ~ 71149882 (-)
G435176 NA other downstream 43912 71068025 ~ 71068887 (-)
G435234 NA other downstream 121001 70990892 ~ 70991798 (-)
G433683 LOC106613912 other downstream 1588009 69486406 ~ 69524790 (-)
G432513 NA other downstream 2106693 69004619 ~ 69006106 (-)
G432338 NA other downstream 2357742 68748558 ~ 68755057 (-)
il23r LOC106613945 other upstream 171811 71285725 ~ 71308015 (-)
G436172 LOC100136696 other upstream 926383 72040962 ~ 72121697 (-)
G436830 LOC106605384 other upstream 1473705 72588284 ~ 72588576 (-)
G436842 NA other upstream 1501717 72616296 ~ 72616944 (-)

Expression


Co-expression Network