Gene
RNA
| Item | Value |
|---|---|
| gene id | G435280 |
| gene name | impact |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 71115272 ~ 71126065 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| impact | Predicted to be involved in several processes, including GCN2-mediated signaling; cellular response to starvation; and negative regulation of nitrogen compound metabolic process. Predicted to act upstream of or within cell differentiation; nervous system development; and regulation of translation. Predicted to be located in cytoplasm. Predicted to be part of polysome. Orthologous to human IMPACT (impact RWD domain protein). |
| description |
|---|
| Impact-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU492827 | True | 1339 | lncRNA | 0.44 | 2 | 71115272 | 71126065 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524470 | LOC106613933 | coding | downstream | 9071 | 71069365 ~ 71106201 (-) |
| LOC110524468 | LOC106613935 | coding | downstream | 57491 | 71046042 ~ 71057781 (-) |
| LOC110524467 | zmat3 | coding | downstream | 81695 | 71021672 ~ 71033577 (-) |
| LOC110524463 | tbl1xr1 | coding | downstream | 244875 | 70836815 ~ 70870397 (-) |
| LOC110524459 | spata16 | coding | downstream | 1110555 | 69950204 ~ 70004717 (-) |
| LOC110524473 | LOC106613938 | coding | upstream | 37254 | 71163319 ~ 71177625 (-) |
| LOC110524474 | LOC106613939 | coding | upstream | 68709 | 71194774 ~ 71199198 (-) |
| LOC110524475 | LOC106613941 | coding | upstream | 73154 | 71199219 ~ 71209549 (-) |
| LOC110524476 | LOC106613943 | coding | upstream | 87648 | 71213713 ~ 71219951 (-) |
| LOC110524478 | LOC106613944 | coding | upstream | 99947 | 71226012 ~ 71242283 (-) |
| G435282 | ycu9 | non-coding | downstream | 693 | 71112799 ~ 71114579 (-) |
| G435177 | NA | non-coding | downstream | 47452 | 71066540 ~ 71067820 (-) |
| G435182 | NA | non-coding | downstream | 95649 | 71017404 ~ 71019623 (-) |
| G435246 | LOC106613930 | non-coding | downstream | 104669 | 71006234 ~ 71010603 (-) |
| G435244 | NA | non-coding | downstream | 110803 | 71004249 ~ 71004469 (-) |
| G435291 | NA | non-coding | upstream | 5413 | 71131478 ~ 71131685 (-) |
| G435305 | LOC106584301 | non-coding | upstream | 22701 | 71148766 ~ 71149086 (-) |
| G435306 | NA | non-coding | upstream | 23311 | 71149376 ~ 71149882 (-) |
| G435307 | NA | non-coding | upstream | 25299 | 71151364 ~ 71152191 (-) |
| G435313 | NA | non-coding | upstream | 32875 | 71158940 ~ 71159141 (-) |
| G435176 | NA | other | downstream | 46385 | 71068025 ~ 71068887 (-) |
| G435234 | NA | other | downstream | 123474 | 70990892 ~ 70991798 (-) |
| G433683 | LOC106613912 | other | downstream | 1590482 | 69486406 ~ 69524790 (-) |
| G432513 | NA | other | downstream | 2109166 | 69004619 ~ 69006106 (-) |
| G432338 | NA | other | downstream | 2360215 | 68748558 ~ 68755057 (-) |
| il23r | LOC106613945 | other | upstream | 160325 | 71285725 ~ 71308015 (-) |
| G436172 | LOC100136696 | other | upstream | 914897 | 72040962 ~ 72121697 (-) |
| G436830 | LOC106605384 | other | upstream | 1462219 | 72588284 ~ 72588576 (-) |
| G436842 | NA | other | upstream | 1490231 | 72616296 ~ 72616944 (-) |
