G435306


Basic Information

Item Value
gene id G435306
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 71149376 ~ 71149882 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU492854
AAGTATCACTGCCTCAGCCTTTCTTTAACATTAGTACAGAACCCACTATTTaaaaaaggtttaaaaaggcttctgaagtttgtaatttccacattGAAATTGAAGACTTGATTTacccttatgaaaaatgtatgaacCCCTACCAAAATGTCCATTGATTATAATTTGCATCatcattcacatttcctgttgctgcattaTTATTTTCCTGCtctagcaaactggctcaaattaagatcctacatctgtatattaCCTCTGTGTCATCACCATGTTCGCAACAAAGTGATGTAGAAGTAGGGGTAAACACATGGCAATCACACACACCAAGGAACACTTGATTTGGTATTACACTGAACTATTCTTTCACATTTCACTGAAAATAACAGTGAAAATCTTTTTCTACATAGCACATTTACAAGTATACCAGTACCATTCAGATCTATAACTGGCAGAGACACGAAGCACTGATAAGATTTGAGATTTCCTCCCAGTCCTAGGAGCATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU492854 True 507 lncRNA 0.36 1 71149376 71149882

Neighbor

gene id symbol gene type direction distance location
LOC110524470 LOC106613933 coding downstream 43175 71069365 ~ 71106201 (-)
LOC110524468 LOC106613935 coding downstream 91595 71046042 ~ 71057781 (-)
LOC110524467 zmat3 coding downstream 115799 71021672 ~ 71033577 (-)
LOC110524463 tbl1xr1 coding downstream 278979 70836815 ~ 70870397 (-)
LOC110524459 spata16 coding downstream 1144659 69950204 ~ 70004717 (-)
LOC110524473 LOC106613938 coding upstream 13437 71163319 ~ 71177625 (-)
LOC110524474 LOC106613939 coding upstream 44892 71194774 ~ 71199198 (-)
LOC110524475 LOC106613941 coding upstream 49337 71199219 ~ 71209549 (-)
LOC110524476 LOC106613943 coding upstream 63831 71213713 ~ 71219951 (-)
LOC110524478 LOC106613944 coding upstream 76130 71226012 ~ 71242283 (-)
G435305 LOC106584301 non-coding downstream 290 71148766 ~ 71149086 (-)
G435291 NA non-coding downstream 17691 71131478 ~ 71131685 (-)
G435280 impact non-coding downstream 23311 71115272 ~ 71126065 (-)
G435283 NA non-coding downstream 33284 71115834 ~ 71116092 (-)
G435282 ycu9 non-coding downstream 34797 71112799 ~ 71114579 (-)
G435307 NA non-coding upstream 1482 71151364 ~ 71152191 (-)
G435313 NA non-coding upstream 9058 71158940 ~ 71159141 (-)
G435359 NA non-coding upstream 92660 71242542 ~ 71242817 (-)
G435361 NA non-coding upstream 95275 71245157 ~ 71245387 (-)
G435383 NA non-coding upstream 144861 71294743 ~ 71295021 (-)
G435176 NA other downstream 80489 71068025 ~ 71068887 (-)
G435234 NA other downstream 157578 70990892 ~ 70991798 (-)
G433683 LOC106613912 other downstream 1624586 69486406 ~ 69524790 (-)
G432513 NA other downstream 2143270 69004619 ~ 69006106 (-)
G432338 NA other downstream 2394319 68748558 ~ 68755057 (-)
il23r LOC106613945 other upstream 136508 71285725 ~ 71308015 (-)
G436172 LOC100136696 other upstream 891080 72040962 ~ 72121697 (-)
G436830 LOC106605384 other upstream 1438402 72588284 ~ 72588576 (-)
G436842 NA other upstream 1466414 72616296 ~ 72616944 (-)

Expression


Co-expression Network