Gene
RNA
| Item | Value |
|---|---|
| gene id | G434747 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 71150416 ~ 71151014 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| TC1-like transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU492216 | True | 599 | lncRNA | 0.51 | 1 | 71150416 | 71151014 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524471 | LOC106613937 | coding | upstream | 316 | 71139770 ~ 71150100 (+) |
| impact | ycu9 | coding | upstream | 20188 | 71107095 ~ 71130228 (+) |
| LOC110524466 | LOC106613934 | coding | upstream | 85258 | 71055569 ~ 71065158 (+) |
| lamp3 | lamp3 | coding | upstream | 97204 | 71050056 ~ 71053212 (+) |
| pik3ca | pik3ca | coding | upstream | 104433 | 71034020 ~ 71045983 (+) |
| LOC110522992 | LOC106613477 | coding | downstream | 158330 | 71309344 ~ 71324730 (+) |
| si:dkey-183n20.15 | LOC106613949 | coding | downstream | 190488 | 71341502 ~ 71354918 (+) |
| LOC110522993 | LOC106613952 | coding | downstream | 273357 | 71424371 ~ 71434943 (+) |
| mmachc | mmachc | coding | downstream | 289102 | 71440116 ~ 71442558 (+) |
| LOC110524490 | LOC106613954 | coding | downstream | 311763 | 71462777 ~ 71490438 (+) |
| G434685 | NA | non-coding | upstream | 82533 | 71066535 ~ 71067883 (+) |
| G434682 | NA | non-coding | upstream | 84334 | 71065500 ~ 71066082 (+) |
| G434702 | NA | non-coding | upstream | 130979 | 71017405 ~ 71019437 (+) |
| G434692 | NA | non-coding | upstream | 150334 | 70999806 ~ 71000082 (+) |
| G434679 | NA | non-coding | upstream | 156076 | 70993634 ~ 70994340 (+) |
| G434754 | NA | non-coding | downstream | 10935 | 71161949 ~ 71162234 (+) |
| G434759 | NA | non-coding | downstream | 16587 | 71167601 ~ 71206727 (+) |
| G434792 | LOC106613943 | non-coding | downstream | 67775 | 71218789 ~ 71223578 (+) |
| G434796 | NA | non-coding | downstream | 73198 | 71224212 ~ 71224475 (+) |
| G434797 | NA | non-coding | downstream | 74274 | 71225288 ~ 71225617 (+) |
| G434653 | NA | other | upstream | 190484 | 70959610 ~ 70959932 (+) |
| LOC110524423 | LOC106613476 | other | upstream | 2936312 | 68212224 ~ 68214236 (+) |
| G430796 | LOC106613888 | other | upstream | 3046882 | 68103179 ~ 68103534 (+) |
| LOC110524407 | LOC106613876 | other | upstream | 3686093 | 67458540 ~ 67464323 (+) |
| G429156 | NA | other | upstream | 4102252 | 66981949 ~ 67048164 (+) |
| G434829 | NA | other | downstream | 147601 | 71298615 ~ 71298900 (+) |
| ralgps2 | LOC106613957 | other | downstream | 524857 | 71552653 ~ 71687963 (+) |
| G436403 | NA | other | downstream | 1352446 | 72503460 ~ 72504435 (+) |
| G436588 | NA | other | downstream | 1844485 | 72995499 ~ 72995735 (+) |
