XLOC_023517


Basic Information

Item Value
gene id XLOC_023517
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 27462936 ~ 27463524 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00047211
TTGATAAAAAGAACAGGATGTGCTGTATAAATCTTAAAGCACCTTGGCTCAGTGCAAAGATAGAACATCTAGAAAAGAAGGGgataaagtgtaaaaataaacactgaaaactagGCAGCTGTGAATGTTATCCAGAGTTTGAACTTCAGCACCCACACTACAAAgaagagagggggggggggtccTATGCTACGCTATACAATCCTggttctttcattctttttctttttggcttagtccctttattaatcccattattaatccctttattaatccctttattaatctggggtcactacagcagaataaaccgctaatctatccagcatatgttttacgcagcggatgcccttccagtcgcaacccatacTGGGAAAATCCTGCTTCTTTCTatgctgaaatttttttttttaaaggaac

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00047211 True 420 lncRNA 0.39 2 27462936 27463524

Neighbor

gene id symbol gene type direction distance location
XLOC_023516 ccl34b.9 coding downstream 1641 27459604 ~ 27461295 (-)
XLOC_023515 ccl34b.8 coding downstream 10448 27450085 ~ 27452488 (-)
XLOC_023514 si:dkey-25o1.7 coding downstream 26617 27434876 ~ 27436319 (-)
XLOC_023513 CR383669.2 coding downstream 32324 27428141 ~ 27430612 (-)
XLOC_023512 si:dkey-25o1.7 coding downstream 39239 27421076 ~ 27423697 (-)
XLOC_023518 NA coding upstream 37 27463561 ~ 27464451 (-)
XLOC_023519 cxl34b.11 coding upstream 6573 27470097 ~ 27473771 (-)
XLOC_023520 NA coding upstream 26291 27489815 ~ 27491197 (-)
XLOC_023521 NA coding upstream 293352 27756876 ~ 27776814 (-)
XLOC_023522 hs6st1b coding upstream 320422 27783946 ~ 27879182 (-)
XLOC_023665 dre-mir-735 misc upstream 10714437 38177961 ~ 38178027 (-)
XLOC_023507 NA non-coding downstream 467772 26948712 ~ 26995164 (-)
XLOC_023503 NA non-coding downstream 814913 26641899 ~ 26648023 (-)
XLOC_023496 NA non-coding downstream 1093751 26354696 ~ 26369185 (-)
XLOC_023491 NA non-coding downstream 1226358 26232700 ~ 26236578 (-)
XLOC_023490 NA non-coding downstream 1430665 26031248 ~ 26032271 (-)
XLOC_023523 NA non-coding upstream 445431 27908955 ~ 27951204 (-)
XLOC_023524 NA non-coding upstream 617864 28081388 ~ 28115364 (-)

Expression


Co-expression Network