G435435


Basic Information

Item Value
gene id G435435
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 71432611 ~ 71434941 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU493002
TGGTTTCATATCTTTAATCAAAAAACATCATCACTCCAGAATCGACGTCAAACAGTAAAACATATCAACCTTATAATACAACCAGTTAACTTTTTGGCACTTCATATAAGGGACTACTAACACATGGGTGCAAATGAACTACCATTCCACTCCACATGGAGTCAAAATGAACTACCATTCCACTCCACATGGAGTCAAAATGAACCACTCTGTTTCAACTCTGACTTAAGTCCCGTTGATGCAGATAACTGGCAAGGCAACAAACGTCAGCGGCGTCTGCAACAAACTAATCTGGTAGCCCACGCAGGAACACTAAAGCCTAGACTAAATCCGGACCGTGGAAGATCTACACTatagcgtgattgaaatttaaaggcaatggttCCGCATTcatggagactgcattcacgggaAACGCAACATACGTCGGCTCAAatggaaatgacctttacatttcaatcgcgCTGTAACGCGTATCTTCAGCAGTCTGGATTTCATCTAGCCCTAAATCAGCTAACTTTGACAAACATTCAGAAATAGACATAACTATTGCTTTTCTAATTTGTTTAAAAATGTCAACTTTGAAGTCAATTATACCATGTCGTTTGATTTCAAGTCTACCTTTCTTTATGAAGTTGGAATGTAAAGTTAATTCAGAATATTATGAAATTTAGCTGGCTAACTCTTTGACCCTGCTCTGTGCCATACTCCACTGTCTGTGCCATATATACTGTCTCCAATACAGGCCTATGGCTTCAACTCAAGTCTCCCCAATAGAGGTTggggtagggaaggagggagggggtgttcttttctcctgtgtgtctAACAAACGCAGACTAACACACAGACTGCATTCCCCTCACATCAATGGAGCATTATGCTCATTATGTCACAAAAGCCTTACATTAAAGagtttctctctctgacctcGTGCTATACATTTACAATGTCTGTGTTCATGGAGTAGTTTATCAGAGTCCCCTTCCCTTGAGACAGTTAATGGACTGCATGCTAATGGTAGCGGCTAGCACTGACTGACTTGGGCAACAAGTTACCCTCATGTCAAGTAGCTACACGATTAAACCAATGAATGAATTGTATTGAAAGACAACTGGCCAAATTCAGTTGGAAACACTGCTGCTGAATCTGCCCAAGGCTCTTCCTTACTAAGACATGTTAGAACATAGGTCTCGGCCTGGCTGTGAGAACTACAATAACAGACAAACCAGCCTTAGAGTTCACAACACGTGCTTTGAAATGTAGAATTCTAACAGGCATGGAATGTATTGAGCCGCCATCGAGGATGGTTTCTCTGTATTGTACTCTGTAAATAGCTCTAGTGGGGTGGAAGAGTCCATTCAGGCTTTATATAAAGATAAATGTACTAAAGATACTCAGAGAGACAACCTCCCCCTTACAAGTGTGACTGACCAGGTTTGAACCCAGGTTGTCTGCAGGCCACAAGGCTGTGTTAGCCCAATGAACTAACACCACCAGAGACTCCCAATAGAGAAACAAAATGAACAATAACAAGCAGGATCTTTAGAGAGGAACTAGTTTCCATGGAAACGCTCAACTTAAATACCCCCAAaccacacccccccacccccacatacGCACGTGCATGCTCGCTCAACCAtgcacagacacgcacgcacacacagacacacatacatgtcCTCTGTAACGTAAAGTGCAACCGTACTGTACAACACTATATAGCCAGGCACAAGTAGCCTCTAACTAGTGATGAAAGAGAGGATCCCTCGTTACCGAACACTCAACCAAAACACAGCTGACAGAGTGCACGCTTGAATATAGAAGGTAGAATGTAGAAGTGGGAATGCTGCTGATGGAACTTCGGATCCACATAGACCAGGAAAAGAGCTGGTCACAATCACACAGAAACCCCCTGTTGCTCACAGAGACACAAAGGTGGTGAGGGAACGCCAGGGATGCATCTCAATGGTCTAAAATGGcgcctccctctcctcatctcctccatctGCACTGATTTGAAAACACAGGGTCGATAAAAGCAATATGGAGGATGCCTATCAGCAACTGGTTTTCACCAGTCCACGTCTCATGTCAGTGCGGATAAAAGAAAGGATATGAGGACAGGGGACAAGGATAGAAGGCCAGGTTGGActatagagagggagaaggtcTGTGGGGGTCTGGCTGTTCCATCAGGTCAGACTGTGTCCTCCATCATCATCAGTAGCTGTACATAGACAGGGGAGTATCCTCCATCATATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU493002 True 2265 lncRNA 0.44 2 71432611 71434941

Neighbor

gene id symbol gene type direction distance location
ipo13 LOC106613950 coding downstream 9102 71371673 ~ 71423509 (-)
pfas pfas coding downstream 65924 71355068 ~ 71366687 (-)
hook1 LOC106613947 coding downstream 91267 71328260 ~ 71341344 (-)
il23r LOC106613945 coding downstream 124596 71285725 ~ 71308015 (-)
il12rb2 i12r2 coding downstream 147301 71269872 ~ 71285310 (-)
LOC110524487 LOC106613951 coding upstream 94 71435035 ~ 71440118 (-)
LOC118964746 NA coding upstream 18205 71453146 ~ 71453261 (-)
zyg11 LOC106613955 coding upstream 97511 71532452 ~ 71542743 (-)
angptl1a LOC106613958 coding upstream 186232 71621173 ~ 71661464 (-)
faslg LOC106613961 coding upstream 346740 71781681 ~ 71792919 (-)
G435386 NA non-coding downstream 133936 71298465 ~ 71298675 (-)
G435383 NA non-coding downstream 137590 71294743 ~ 71295021 (-)
G435361 NA non-coding downstream 187224 71245157 ~ 71245387 (-)
G435359 NA non-coding downstream 189794 71242542 ~ 71242817 (-)
G435313 NA non-coding downstream 273470 71158940 ~ 71159141 (-)
G435496 NA non-coding upstream 77900 71512841 ~ 71513192 (-)
G435509 LOC106614023 non-coding upstream 80342 71515283 ~ 71516296 (-)
G435510 NA non-coding upstream 82682 71517623 ~ 71517854 (-)
G435511 NA non-coding upstream 84326 71519267 ~ 71519786 (-)
LOC110524478 LOC106613944 other downstream 202022 71226012 ~ 71242283 (-)
G435176 NA other downstream 363724 71068025 ~ 71068887 (-)
G435234 NA other downstream 440813 70990892 ~ 70991798 (-)
G433683 LOC106613912 other downstream 1907821 69486406 ~ 69524790 (-)
G436172 LOC100136696 other upstream 606021 72040962 ~ 72121697 (-)
G436830 LOC106605384 other upstream 1153343 72588284 ~ 72588576 (-)
G436842 NA other upstream 1181355 72616296 ~ 72616944 (-)
G436847 NA other upstream 1237213 72672154 ~ 72672826 (-)
G436873 NA other upstream 1339620 72774561 ~ 72775868 (-)

Expression


Co-expression Network