G435610


Basic Information

Item Value
gene id G435610
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 71708032 ~ 71709663 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU493208
TCTCTAAAACGTCAGTAGCATACTCAGAGTATGGCACCCCCTACCCCAGGTATAGACAACTAGATACAGCTGCCGGATGATTTTTGTTGGAGCAGATGCTCGGGGGGGCTGAACATAATAATgaacactgcaaattgaccacaactaagctcaaagagattgtatttgaaaataatgtCATACCTCGATTAGATTGACACGATAACATCTCTTATGATTTGTCAGAAtatttgggaacagatttcctaaattacacattttttttgcagGATTCTTGTGATTTTACAGTCTTTTTTGACCAAAAACTGATTGCGGGACGTTTTTGGGTGACCGACTCCTGCCCTACACTCATGCTCACACATTCAggcacacacattcagacacgaCAGTAAATTAGGTTAATTTAACATTACAATTCTCATAATTATACTCTCTCAGTAATGCTATTCAACAGTTCGTTATGTACACGCTGGTAATGTCTCAAAGGCTACCCTATTCCCAAAATAGTGCACTAGTCTTGACCAAAGCCCTAGAGTATGTAGCCAACCTTTAAAACCTCATTGGCCAGTTTCTTAGACCCAGATCAAGTCGAATCCTGGAGTAAAAAAAGCATGCTTAATGAACAATCTCTTTTGAAAGTGCTTTTAATTCAGAAATAGGAATAAGGTCTGAGAAACTGGGGCCAAAACTAGTACAATATATATTGAATAGAGCATCATGAGACATCCATAGTCAGTTGGCAGATTCTGAAATTGCACACAATTCcctccctatacagtgcactacttttggctagAGCCTtTCGGACACAGACACGTCTGTTTGTTAGTCACAATCAGACTGACCACAAAATTTCCCTTGGTCATTTAACCAGTCTCCCTCTCCACTGTCAGTCCAGTGGATTTTTCTGGGAGTGTTGTGTCCACATGGAGTGGGTTTTATGGCTGTGTGAGCGACCCCTGCTATCCTGACTGCCGCTGGGTTGAGTCCTATGGCTTTGGTTCCCTCGTTATTACTggacgagagagggagggtttggcacaaggtgtgtgtgtgtgcagaaggCAGAGGAGAGACATTGGGGATACAGTTCCTCAGATATAGATCCCATTAGGTTCAAGTGTTCTAGTGTGGAGGGAAACAGTTTGTAGAGGAAACCACTTCCTGCTGCTGGAGTCATTTCCTGTCCCATTCTGGGAGGCCATGAGACTTGGAGCGGGAGTGTGGGAGGGGGTTTATCCTCCAGCTCCTACCATGGCTCAACCCTCTCTCTCGATCCTTGGGTGAGAGCTTCTCCTTTCCCTCAtctctcatccatccctctctcttgtcctccACAAGGGATGGGAcaggtctctcctctcttccatccctctctcctgtcctcctttaGGAGTGTGGCAGGTTCAAGCGGTCCTCTATCAGTGTGCTGTCAGGGCCCTGTGACTCCACACACTGCCGGATGGTTGCTATGACACCAGACAGACGTCTGTCCAGGGCGGCCAGGTGAGGCTCGGCCAGGACGGGGTTGATGGGGTCAAAGGTCAGGGCCTGCCTCATGGCTGAACTCAGAGCCCCTGCCCTCAGCAGGTTCAACCTATTC

Function

NR:

description
glycosaminoglycan xylosylkinase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU493208 True 1603 lncRNA 0.47 2 71708032 71709663

Neighbor

gene id symbol gene type direction distance location
angptl1a LOC106613958 coding downstream 46568 71621173 ~ 71661464 (-)
zyg11 LOC106613955 coding downstream 165289 71532452 ~ 71542743 (-)
LOC118964746 NA coding downstream 254771 71453146 ~ 71453261 (-)
LOC110524487 LOC106613951 coding downstream 267914 71435035 ~ 71440118 (-)
ipo13 LOC106613950 coding downstream 284523 71371673 ~ 71423509 (-)
faslg LOC106613961 coding upstream 72018 71781681 ~ 71792919 (-)
si:dkey-86e18.1 LOC106613962 coding upstream 107882 71817545 ~ 71827015 (-)
jun jun coding upstream 121978 71831641 ~ 71833770 (-)
prdx6 LOC106584278 coding upstream 313063 72022726 ~ 72032047 (-)
LOC110524500 NA coding upstream 349908 72059571 ~ 72060414 (-)
G435608 NA non-coding downstream 11492 71695821 ~ 71696540 (-)
G435606 NA non-coding downstream 13898 71693934 ~ 71694134 (-)
G435602 NA non-coding downstream 20874 71682913 ~ 71687158 (-)
G435517 NA non-coding downstream 180001 71527825 ~ 71528031 (-)
G435513 NA non-coding downstream 185877 71521909 ~ 71522155 (-)
G435624 NA non-coding upstream 16380 71726043 ~ 71726262 (-)
G435640 NA non-coding upstream 20406 71730069 ~ 71740813 (-)
G435901 NA non-coding upstream 161648 71871311 ~ 71871524 (-)
G435997 NA non-coding upstream 322726 72032389 ~ 72032606 (-)
il23r LOC106613945 other downstream 421040 71285725 ~ 71308015 (-)
LOC110524478 LOC106613944 other downstream 477443 71226012 ~ 71242283 (-)
G435176 NA other downstream 639145 71068025 ~ 71068887 (-)
G435234 NA other downstream 716234 70990892 ~ 70991798 (-)
G433683 LOC106613912 other downstream 2183242 69486406 ~ 69524790 (-)
G436172 LOC100136696 other upstream 331299 72040962 ~ 72121697 (-)
G436830 LOC106605384 other upstream 878621 72588284 ~ 72588576 (-)
G436842 NA other upstream 906633 72616296 ~ 72616944 (-)
G436847 NA other upstream 962491 72672154 ~ 72672826 (-)
G436873 NA other upstream 1064898 72774561 ~ 72775868 (-)

Expression


Co-expression Network