G436015



Basic Information


Item Value
gene id G436015
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 72171171 ~ 72171409 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU493648
TTCCTTCTACGTCATGACTTGGTTTGTACTCTGACACGCTgcctctgaaatgcactgtcaactgtgggaccttatatagacaggtgtgttccaaatcatgtccaatcaattgaatttaccacaggtggactccaatcaagttgtagaaacatctcaaggatgaccaatggaaacaggatgcacctgagctcaatttcgagtctcatagcaaaaggtctgagtacttatgtaaataaggt

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU493648 True 239 lncRNA 0.42 1 72171171 72171409

Neighbor


gene id symbol gene type direction distance location
LOC110524503 LOC106613969 coding upstream 3729 72136286 ~ 72167442 (+)
LOC110524502 LOC106613967 coding upstream 36897 72098758 ~ 72134274 (+)
LOC110524501 LOC106613965 coding upstream 74045 72068869 ~ 72097126 (+)
LOC100136696 LOC100136696 coding upstream 117907 72041148 ~ 72053264 (+)
LOC110522995 LOC106613964 coding upstream 137068 72033129 ~ 72034103 (+)
LOC110524504 vamp4 coding downstream 3708 72175117 ~ 72209661 (+)
myoc LOC106613972 coding downstream 48488 72219897 ~ 72228181 (+)
mettl13 LOC106613973 coding downstream 63804 72235213 ~ 72239514 (+)
LOC110524507 LOC106613976 coding downstream 68509 72239918 ~ 72269866 (+)
LOC110524510 LOC106613977 coding downstream 191443 72362852 ~ 72377582 (+)
G435801 NA non-coding upstream 165581 72002883 ~ 72005590 (+)
G435716 NA non-coding upstream 322168 71848450 ~ 71849003 (+)
G435626 NA non-coding upstream 444177 71726686 ~ 71726994 (+)
G435621 NA non-coding upstream 446432 71723463 ~ 71724739 (+)
G435024 NA non-coding upstream 459758 71710376 ~ 71711413 (+)
G436018 NA non-coding downstream 38436 72209845 ~ 72211677 (+)
G436017 NA non-coding downstream 40986 72212395 ~ 72216387 (+)
G436049 NA non-coding downstream 85520 72256929 ~ 72260707 (+)
G436059 NA non-coding downstream 108785 72280194 ~ 72284469 (+)
G436051 LOC106613974 non-coding downstream 113234 72284643 ~ 72285257 (+)
ralgps2 LOC106613957 other upstream 484002 71552653 ~ 71687963 (+)
G434829 NA other upstream 872271 71298615 ~ 71298900 (+)
G434792 LOC106613943 other upstream 947593 71218789 ~ 71223578 (+)
G434653 NA other upstream 1211239 70959610 ~ 70959932 (+)
LOC110524423 LOC106613476 other upstream 3957067 68212224 ~ 68214236 (+)
G436403 NA other downstream 332051 72503460 ~ 72504435 (+)
G436588 NA other downstream 824090 72995499 ~ 72995735 (+)
G437327 NA other downstream 1284892 73456301 ~ 73495084 (+)
LOC110524560 LOC106560270 other downstream 2591795 74729349 ~ 74770168 (+)
G438719 NA other downstream 2600600 74772009 ~ 74776469 (+)

Expression



Co-expression Network