G436242


Basic Information

Item Value
gene id G436242
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 72211741 ~ 72212337 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU493923
atcactctgacatcaatgcaaatataTTCATTCGAagatctaatcaaacacttcatgagagcccatgagctcatgttgcgcaacatttctataggcaatGCAATTGCCTGAGATGTATTTTTCCTGCTGCCCCGTTTCAATACAgctgcatgataatggtccaatctaaatcaaaacaaatgtcacatatattatttagtatatgtaaagaccagattaaatcaagaatagtctgatgggtgacaattaGCTTATCAcgtgtgaatgatatattataacatgtgaatgatgcccagcataagaaacaaagCCTTTTTTTGTTGCGACTTGTTCAATCATATTCGCACACCtcgtgtagcctagcccataggcctatatgttttaataaggtttgtatcacacctcgtgtagcctagcccataggcctatatgttttaataaggtttgtatcacacctcgtgtagcctagcccataggcctatatgttttaatacggGTTGTATCACACCtcgtgtagcctagcccataggcctatatgttttaataaggtttgtatcacacctcgtgtagcctagcccataggcctatatgttttaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU493923 True 597 lncRNA 0.39 1 72211741 72212337

Neighbor

gene id symbol gene type direction distance location
LOC110524500 NA coding downstream 151327 72059571 ~ 72060414 (-)
prdx6 LOC106584278 coding downstream 179694 72022726 ~ 72032047 (-)
jun jun coding downstream 377971 71831641 ~ 71833770 (-)
si:dkey-86e18.1 LOC106613962 coding downstream 384726 71817545 ~ 71827015 (-)
faslg LOC106613961 coding downstream 418822 71781681 ~ 71792919 (-)
LOC110522996 NA coding upstream 19827 72232164 ~ 72235211 (-)
LOC118964719 NA coding upstream 59539 72271876 ~ 72272749 (-)
LOC110524508 LOC106613974 coding upstream 63121 72275458 ~ 72359871 (-)
LOC110524515 LOC106560227 coding upstream 639731 72852068 ~ 72866268 (-)
LOC110524517 LOC106560232 coding upstream 792918 73005255 ~ 73010401 (-)
G436230 NA non-coding downstream 37719 72173702 ~ 72174022 (-)
G436204 NA non-coding downstream 85462 72123806 ~ 72126279 (-)
G436199 LOC106613965 non-coding downstream 115177 72092717 ~ 72096564 (-)
G436194 LOC106613965 non-coding downstream 127110 72084150 ~ 72084631 (-)
G435997 NA non-coding downstream 179135 72032389 ~ 72032606 (-)
G436240 NA non-coding upstream 58 72212395 ~ 72216385 (-)
G436270 NA non-coding upstream 4560 72216897 ~ 72217097 (-)
G436271 NA non-coding upstream 6194 72218531 ~ 72218760 (-)
G436272 NA non-coding upstream 6717 72219054 ~ 72219291 (-)
G436247 myoc non-coding upstream 14656 72226993 ~ 72256086 (-)
G436172 LOC100136696 other downstream 90044 72040962 ~ 72121697 (-)
il23r LOC106613945 other downstream 924749 71285725 ~ 71308015 (-)
LOC110524478 LOC106613944 other downstream 981152 71226012 ~ 71242283 (-)
G435176 NA other downstream 1142854 71068025 ~ 71068887 (-)
G435234 NA other downstream 1219943 70990892 ~ 70991798 (-)
G436830 LOC106605384 other upstream 375947 72588284 ~ 72588576 (-)
G436842 NA other upstream 403959 72616296 ~ 72616944 (-)
G436847 NA other upstream 459817 72672154 ~ 72672826 (-)
G436873 NA other upstream 562224 72774561 ~ 72775868 (-)
G437054 NA other upstream 882457 73094794 ~ 73095336 (-)

Expression


Co-expression Network