Gene
RNA
| Item | Value |
|---|---|
| gene id | G436059 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 72280194 ~ 72284469 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: SUN domain-containing ossification factor-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU493702 | True | 670 | lncRNA | 0.51 | 2 | 72280194 | 72284469 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524507 | LOC106613976 | coding | upstream | 10328 | 72239918 ~ 72269866 (+) |
| mettl13 | LOC106613973 | coding | upstream | 40680 | 72235213 ~ 72239514 (+) |
| myoc | LOC106613972 | coding | upstream | 52013 | 72219897 ~ 72228181 (+) |
| LOC110524504 | vamp4 | coding | upstream | 70533 | 72175117 ~ 72209661 (+) |
| LOC110524503 | LOC106613969 | coding | upstream | 112752 | 72136286 ~ 72167442 (+) |
| LOC110524510 | LOC106613977 | coding | downstream | 78383 | 72362852 ~ 72377582 (+) |
| LOC110524509 | LOC106613979 | coding | downstream | 93313 | 72377782 ~ 72393450 (+) |
| LOC110524511 | LOC106560226 | coding | downstream | 188648 | 72473117 ~ 72830580 (+) |
| LOC110524512 | NA | coding | downstream | 544847 | 72829316 ~ 72830580 (+) |
| LOC110524513 | LOC106560217 | coding | downstream | 549428 | 72833897 ~ 72851314 (+) |
| G436049 | NA | non-coding | upstream | 19487 | 72256929 ~ 72260707 (+) |
| G436017 | NA | non-coding | upstream | 63807 | 72212395 ~ 72216387 (+) |
| G436018 | NA | non-coding | upstream | 68517 | 72209845 ~ 72211677 (+) |
| G436015 | NA | non-coding | upstream | 108785 | 72171171 ~ 72171409 (+) |
| G435801 | NA | non-coding | upstream | 274604 | 72002883 ~ 72005590 (+) |
| G436051 | LOC106613974 | non-coding | downstream | 174 | 72284643 ~ 72285257 (+) |
| G436069 | NA | non-coding | downstream | 11777 | 72296246 ~ 72298469 (+) |
| G436131 | NA | non-coding | downstream | 85129 | 72369598 ~ 72369995 (+) |
| G436155 | NA | non-coding | downstream | 142916 | 72427385 ~ 72429970 (+) |
| ralgps2 | LOC106613957 | other | upstream | 593025 | 71552653 ~ 71687963 (+) |
| G434829 | NA | other | upstream | 981294 | 71298615 ~ 71298900 (+) |
| G434792 | LOC106613943 | other | upstream | 1056616 | 71218789 ~ 71223578 (+) |
| G434653 | NA | other | upstream | 1320262 | 70959610 ~ 70959932 (+) |
| LOC110524423 | LOC106613476 | other | upstream | 4066090 | 68212224 ~ 68214236 (+) |
| G436403 | NA | other | downstream | 218991 | 72503460 ~ 72504435 (+) |
| G436588 | NA | other | downstream | 711030 | 72995499 ~ 72995735 (+) |
| G437327 | NA | other | downstream | 1171832 | 73456301 ~ 73495084 (+) |
| LOC110524560 | LOC106560270 | other | downstream | 2478735 | 74729349 ~ 74770168 (+) |
| G438719 | NA | other | downstream | 2487540 | 74772009 ~ 74776469 (+) |
