G436051 (LOC106613974)


Basic Information

Item Value
gene id G436051
gene name LOC106613974
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 72284643 ~ 72285257 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU493693
CTCTCTGTAGCTGTGAGACAGTCATGGTGAGGTTGATCATCAGCTTGGTGACGTTCTCCAGCTGGCCCTGTAACATCTGGATAGACTCTGTCTGCCGCTGGTCCTGTTCTTCAGCGATGCGGGAGGTGTTCTCCAGTTTGACTATGGTCTTGTTGAATGCTCTCTGCATCTCCTCCATCTGCTTACGATACCTCTGGCTGAGTTCCTCCAGGTATCTGCTGCTGAGGGACATGTTCATCTCCAGGGCTTTGATCCTGTTGTTCAACCTCATGAACACACTCTCCTTCTGACTGGAGCCATACACGTTCACCCCTCCATTCCCTCCAATGTACTCCCCCG

Function

NR:

description
SUN domain-containing ossification factor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU493693 True 339 lncRNA 0.52 3 72284643 72285257

Neighbor

gene id symbol gene type direction distance location
LOC110524507 LOC106613976 coding upstream 14777 72239918 ~ 72269866 (+)
mettl13 LOC106613973 coding upstream 45129 72235213 ~ 72239514 (+)
myoc LOC106613972 coding upstream 56462 72219897 ~ 72228181 (+)
LOC110524504 vamp4 coding upstream 74982 72175117 ~ 72209661 (+)
LOC110524503 LOC106613969 coding upstream 117201 72136286 ~ 72167442 (+)
LOC110524510 LOC106613977 coding downstream 77595 72362852 ~ 72377582 (+)
LOC110524509 LOC106613979 coding downstream 92525 72377782 ~ 72393450 (+)
LOC110524511 LOC106560226 coding downstream 187860 72473117 ~ 72830580 (+)
LOC110524512 NA coding downstream 544059 72829316 ~ 72830580 (+)
LOC110524513 LOC106560217 coding downstream 548640 72833897 ~ 72851314 (+)
G436059 NA non-coding upstream 174 72280194 ~ 72284469 (+)
G436049 NA non-coding upstream 23936 72256929 ~ 72260707 (+)
G436017 NA non-coding upstream 68256 72212395 ~ 72216387 (+)
G436018 NA non-coding upstream 72966 72209845 ~ 72211677 (+)
G436015 NA non-coding upstream 113234 72171171 ~ 72171409 (+)
G436069 NA non-coding downstream 10989 72296246 ~ 72298469 (+)
G436131 NA non-coding downstream 84341 72369598 ~ 72369995 (+)
G436155 NA non-coding downstream 142128 72427385 ~ 72429970 (+)
G436168 NA non-coding downstream 171445 72456702 ~ 72457021 (+)
ralgps2 LOC106613957 other upstream 597474 71552653 ~ 71687963 (+)
G434829 NA other upstream 985743 71298615 ~ 71298900 (+)
G434792 LOC106613943 other upstream 1061065 71218789 ~ 71223578 (+)
G434653 NA other upstream 1324711 70959610 ~ 70959932 (+)
LOC110524423 LOC106613476 other upstream 4070539 68212224 ~ 68214236 (+)
G436403 NA other downstream 218203 72503460 ~ 72504435 (+)
G436588 NA other downstream 710242 72995499 ~ 72995735 (+)
G437327 NA other downstream 1171044 73456301 ~ 73495084 (+)
LOC110524560 LOC106560270 other downstream 2477947 74729349 ~ 74770168 (+)
G438719 NA other downstream 2486752 74772009 ~ 74776469 (+)

Expression


Co-expression Network