G436069


Basic Information

Item Value
gene id G436069
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 72296246 ~ 72298469 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU493713
gaggagagaaatcaGGAAAAGGCTGATTCATGCCACAAGCAAGTCAAGCATCTGGTCCTTTTTTTTGGCATTTTCGTAAAATTATTTCCTGACAACATAACAGTGTTGACTGAATGCTTGCTCTACAAGAGACTACAAGGATAAAGCAATAAAGGACAGGGTAAGGTATACGAAGCAAAATAAGGTACAAATAGCATTAAAAGGGAAAtgtattatacagtgcattcagaaagtagtcagacccctagattttccccacattttgttacattacagccttattctataatggattacattgtttccccccctcaatcttcccaaaataccccataatgacaaagaaaaacacGTTTATAGACATTTGGgaatttattaaaataaaaaaacaggaatttaatttttacataagtattcagaccctttactcagtactttgttgaagcacctttggcagtaattacagcctcgagtcttaggtatgacgctacaatcttggtacacctgtatttgggagctcctcccattattctctgcagatcctctcaagctctgtcaagttggatagggagcgttgctgcacagctattttcagttctctccagacaACCTAGACCCAGACAACCTAGACCCAGACAACCTAGACCCAGACAACCTAGACCCAGACAACCTAGACCCAGACAACCTAGACCCAGACAACCTAGACCCAGACAACCTAGACCCAGACAACCTAGACCCAGACAACCTAGACAGAGACCCAGACAACCTAGACAGAGACCCAGACAACCTAGACAGAGACCCAGACAACCTAGACAGAGACCCAGACAACCTAGACAGAGACCCAGACAACCCAGACATAGACCCAGACAACCCAGACATAGACCCAGACAACCCAGACagagacccagacagagacccagacagagacccagacagacaacccagacacacacagacaacccagacacacacagacagacaacctagatacacacagacagacaacctagacacacacagacagacaacctagacacacacagacagacaacctagacacacacagacagacaacctagacacacacagacagacaacctagacacacacagacagacaacctagacacacacagacagacaacctagacacacacagacagacaacctagacacacagacagacaacctagacacacagacagactcagacagacagagacacacagacagaccgagacacacagacaaacagagacacacagacagacagaccaagacATATCAGGTTGATATCAGCTTCAGTTCTTCTTGAAACTAAATAAACTTTGGACCTATTCACACAGTAGTTTGTGAAATTACAATTCATAATTTGGTAACAGTGGCATATTCATACTAACCCAACAACACAAAAAAATCtccccaaaaatattatttgaaacTACACAaagaattaaataaataaatgcaataACACTTAAAGCTTAGATAAGAGAAGATGGCGAGGAGGAGTAGAGTTGAAAGACTACAATATAGTTGGCACTTTCCAATACTTCTTTACTGTATttattacacatagaagtagggaGGAAAGGTAGCTGAAATACATCCAACACCCTCAGAATATTTCCTTCCACATTTTCACCCTCACAATCACATATATGATGTGAGGTTTCAGTAGGGAGCCAGTCTCATGTTGATGACATAGGAAACCTATTGTGAAGTGATGAGGAATTTACCTGGGCTTAGAACATAGAATtcaaatggtgtgtgtgtctgcagtttgtctgtgtatgggtgtttgcagtgtgtgtgtgtgtaggtgtgactgtGTAAGTATGTACCTTGATGTATTTGGCGTAGAGCTGTTCATCCAATGGGAAGCTCTGGACGGTGCGCTCGTCACGGGCGTGGAACGTTCCCAACTTCAACCACTTGTTGGTGGGATacctgagagagagcaagagaacgaGAGGGGT

Function

NR:

description
PREDICTED: SUN domain-containing ossification factor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU493713 True 1978 lncRNA 0.43 3 72296246 72298469

Neighbor

gene id symbol gene type direction distance location
LOC110524507 LOC106613976 coding upstream 26380 72239918 ~ 72269866 (+)
mettl13 LOC106613973 coding upstream 56732 72235213 ~ 72239514 (+)
myoc LOC106613972 coding upstream 68065 72219897 ~ 72228181 (+)
LOC110524504 vamp4 coding upstream 86585 72175117 ~ 72209661 (+)
LOC110524503 LOC106613969 coding upstream 128804 72136286 ~ 72167442 (+)
LOC110524510 LOC106613977 coding downstream 64383 72362852 ~ 72377582 (+)
LOC110524509 LOC106613979 coding downstream 79313 72377782 ~ 72393450 (+)
LOC110524511 LOC106560226 coding downstream 174648 72473117 ~ 72830580 (+)
LOC110524512 NA coding downstream 530847 72829316 ~ 72830580 (+)
LOC110524513 LOC106560217 coding downstream 535428 72833897 ~ 72851314 (+)
G436051 LOC106613974 non-coding upstream 10989 72284643 ~ 72285257 (+)
G436059 NA non-coding upstream 11777 72280194 ~ 72284469 (+)
G436049 NA non-coding upstream 35539 72256929 ~ 72260707 (+)
G436017 NA non-coding upstream 79859 72212395 ~ 72216387 (+)
G436018 NA non-coding upstream 84569 72209845 ~ 72211677 (+)
G436131 NA non-coding downstream 71129 72369598 ~ 72369995 (+)
G436155 NA non-coding downstream 128916 72427385 ~ 72429970 (+)
G436168 NA non-coding downstream 158233 72456702 ~ 72457021 (+)
G436368 NA non-coding downstream 164612 72463081 ~ 72463317 (+)
ralgps2 LOC106613957 other upstream 609077 71552653 ~ 71687963 (+)
G434829 NA other upstream 997346 71298615 ~ 71298900 (+)
G434792 LOC106613943 other upstream 1072668 71218789 ~ 71223578 (+)
G434653 NA other upstream 1336314 70959610 ~ 70959932 (+)
LOC110524423 LOC106613476 other upstream 4082142 68212224 ~ 68214236 (+)
G436403 NA other downstream 204991 72503460 ~ 72504435 (+)
G436588 NA other downstream 697030 72995499 ~ 72995735 (+)
G437327 NA other downstream 1157832 73456301 ~ 73495084 (+)
LOC110524560 LOC106560270 other downstream 2464735 74729349 ~ 74770168 (+)
G438719 NA other downstream 2473540 74772009 ~ 74776469 (+)

Expression


Co-expression Network