G436300



Basic Information


Item Value
gene id G436300
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 72310682 ~ 72310987 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU493991
CACAAGAGcaggccactgagtgagcagagCTTTAACCTTATtttctcatttggaagctaaaatgacatttcatcttttcacaaatagtttcatatttatacatttaaattgcacaacaattccatgtgtagactttccaagatacagtttatgtcatcctgtcatcagtcataatgtctcAGGCGCCAACTGATCTGGCATCGTATTCATtgagtaccaacgcatattttcagctggttggattaccgaaatatggttcctttcccccACCTTTTGATGCTCCCAG

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU493991 True 286 lncRNA 0.39 2 72310682 72310987

Neighbor


gene id symbol gene type direction distance location
LOC118964719 NA coding downstream 37933 72271876 ~ 72272749 (-)
LOC110522996 NA coding downstream 75471 72232164 ~ 72235211 (-)
LOC110524500 NA coding downstream 250268 72059571 ~ 72060414 (-)
prdx6 LOC106584278 coding downstream 278635 72022726 ~ 72032047 (-)
jun jun coding downstream 476912 71831641 ~ 71833770 (-)
LOC110524515 LOC106560227 coding upstream 541081 72852068 ~ 72866268 (-)
LOC110524517 LOC106560232 coding upstream 694268 73005255 ~ 73010401 (-)
LOC110524518 LOC106560233 coding upstream 742857 73051611 ~ 73062414 (-)
LOC110524520 LOC106560236 coding upstream 795052 73106039 ~ 73109903 (-)
LOC110524523 LOC106560237 coding upstream 821115 73132102 ~ 73163431 (-)
G436286 NA non-coding downstream 44098 72265590 ~ 72266584 (-)
G436247 myoc non-coding downstream 54596 72226993 ~ 72256086 (-)
G436272 NA non-coding downstream 91391 72219054 ~ 72219291 (-)
G436271 NA non-coding downstream 91922 72218531 ~ 72218760 (-)
G436336 NA non-coding upstream 84727 72395714 ~ 72396482 (-)
G436337 NA non-coding upstream 85542 72396529 ~ 72396782 (-)
G436339 NA non-coding upstream 98411 72409398 ~ 72409744 (-)
G436340 NA non-coding upstream 98941 72409928 ~ 72410331 (-)
G436343 NA non-coding upstream 103483 72414470 ~ 72414673 (-)
G436172 LOC100136696 other downstream 188985 72040962 ~ 72121697 (-)
il23r LOC106613945 other downstream 1023690 71285725 ~ 71308015 (-)
LOC110524478 LOC106613944 other downstream 1080093 71226012 ~ 71242283 (-)
G435176 NA other downstream 1241795 71068025 ~ 71068887 (-)
G435234 NA other downstream 1318884 70990892 ~ 70991798 (-)
G436830 LOC106605384 other upstream 277297 72588284 ~ 72588576 (-)
G436842 NA other upstream 305309 72616296 ~ 72616944 (-)
G436847 NA other upstream 361167 72672154 ~ 72672826 (-)
G436873 NA other upstream 463574 72774561 ~ 72775868 (-)
G437054 NA other upstream 783807 73094794 ~ 73095336 (-)

Expression



Co-expression Network