XLOC_023523


Basic Information

Item Value
gene id XLOC_023523
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 27908955 ~ 27951204 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046871
CTTCCAACGAGAGGCATAATCCAGTTAGGATTTGAATGGATTTACTGGTTATTCAGCAAGTAAACATCATCAGGCCGTCTTAGGGATGGAGAACAGATGGAGGACTGGATGGATGTGCCTGAACAGGTCAGAGTCATCAGAGGTAGAACGCCCAAGGACATTCTGCAGCGAATCTTCAAcactcagttggcctttctggaCAGAGCATGTGATTGTAATCAATGAAAGGATTCCCACTCTGACGCTCGGCCGCTTCGTCTCTGTGATTATATCAGCTCTGCTCTCTGAGGATGAAAGTAAGGCCTCGCTCTTCTCATGAACTCCTCATCTTTCATAAAATCACTGTCCCTATTGGCCGAGAGCCCTCTTGAGTCACG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046871 True 377 lncRNA 0.47 2 27908955 27951204

Neighbor

gene id symbol gene type direction distance location
XLOC_023522 hs6st1b coding downstream 29773 27783946 ~ 27879182 (-)
XLOC_023521 NA coding downstream 132141 27756876 ~ 27776814 (-)
XLOC_023520 NA coding downstream 417758 27489815 ~ 27491197 (-)
XLOC_023519 cxl34b.11 coding downstream 435184 27470097 ~ 27473771 (-)
XLOC_023518 NA coding downstream 444504 27463561 ~ 27464451 (-)
XLOC_023524 NA coding upstream 130184 28081388 ~ 28115364 (-)
XLOC_023525 bcl2a coding upstream 186006 28137210 ~ 28229618 (-)
XLOC_023526 cox4i1l coding upstream 280398 28231602 ~ 28245872 (-)
XLOC_023527 prkag2a coding upstream 301316 28252520 ~ 28381437 (-)
XLOC_023528 nrros coding upstream 459759 28410963 ~ 28419444 (-)
XLOC_023665 dre-mir-735 misc upstream 10226757 38177961 ~ 38178027 (-)
XLOC_023517 NA non-coding downstream 445431 27462936 ~ 27463524 (-)
XLOC_023507 NA non-coding downstream 913791 26948712 ~ 26995164 (-)
XLOC_023530 NA non-coding upstream 601363 28552567 ~ 28561226 (-)
XLOC_023534 CT961047.1 non-coding upstream 1020880 28972084 ~ 28974899 (-)
XLOC_023536 CR388050.3 non-coding upstream 1083420 29034624 ~ 29034740 (-)
XLOC_023537 CR388050.1 non-coding upstream 1101504 29052708 ~ 29052826 (-)

Expression


Co-expression Network