G436336


Basic Information

Item Value
gene id G436336
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 72395714 ~ 72396482 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU494027
gttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacaacactttttatggataactttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaattttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggttttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatctcgttccacttcatgattgtgtcccacttgtagt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU494027 True 769 lncRNA 0.42 1 72395714 72396482

Neighbor

gene id symbol gene type direction distance location
LOC110524508 LOC106613974 coding downstream 35843 72275458 ~ 72359871 (-)
LOC118964719 NA coding downstream 122965 72271876 ~ 72272749 (-)
LOC110522996 NA coding downstream 160503 72232164 ~ 72235211 (-)
LOC110524500 NA coding downstream 335300 72059571 ~ 72060414 (-)
prdx6 LOC106584278 coding downstream 363667 72022726 ~ 72032047 (-)
LOC110524515 LOC106560227 coding upstream 455586 72852068 ~ 72866268 (-)
LOC110524517 LOC106560232 coding upstream 608773 73005255 ~ 73010401 (-)
LOC110524518 LOC106560233 coding upstream 657362 73051611 ~ 73062414 (-)
LOC110524520 LOC106560236 coding upstream 709557 73106039 ~ 73109903 (-)
LOC110524523 LOC106560237 coding upstream 735620 73132102 ~ 73163431 (-)
G436300 NA non-coding downstream 84727 72310682 ~ 72310987 (-)
G436286 NA non-coding downstream 129130 72265590 ~ 72266584 (-)
G436247 myoc non-coding downstream 139628 72226993 ~ 72256086 (-)
G436337 NA non-coding upstream 47 72396529 ~ 72396782 (-)
G436339 NA non-coding upstream 12916 72409398 ~ 72409744 (-)
G436340 NA non-coding upstream 13446 72409928 ~ 72410331 (-)
G436343 NA non-coding upstream 17988 72414470 ~ 72414673 (-)
G436363 NA non-coding upstream 61782 72458264 ~ 72458723 (-)
G436172 LOC100136696 other downstream 274017 72040962 ~ 72121697 (-)
il23r LOC106613945 other downstream 1108722 71285725 ~ 71308015 (-)
LOC110524478 LOC106613944 other downstream 1165125 71226012 ~ 71242283 (-)
G435176 NA other downstream 1326827 71068025 ~ 71068887 (-)
G435234 NA other downstream 1403916 70990892 ~ 70991798 (-)
G436830 LOC106605384 other upstream 191802 72588284 ~ 72588576 (-)
G436842 NA other upstream 219814 72616296 ~ 72616944 (-)
G436847 NA other upstream 275672 72672154 ~ 72672826 (-)
G436873 NA other upstream 378079 72774561 ~ 72775868 (-)
G437054 NA other upstream 698312 73094794 ~ 73095336 (-)

Expression


Co-expression Network