G436392


Basic Information

Item Value
gene id G436392
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 72487068 ~ 72487278 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU494086
gtCTAATAAATCattgtaatataacctacaccatcacaacaaatcccttctttattttagacaggtctaaagaaacatgatatgaagaaaatgtagtctatttcagaagaacagaatagcatactctgagttgtcctcatgtttggtcctgatgtggctataccatatggctgtgggctacactagttcatttagcagacaagattatctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU494086 True 211 lncRNA 0.35 1 72487068 72487278

Neighbor

gene id symbol gene type direction distance location
LOC110524509 LOC106613979 coding upstream 93618 72377782 ~ 72393450 (+)
LOC110524510 LOC106613977 coding upstream 109486 72362852 ~ 72377582 (+)
LOC110524507 LOC106613976 coding upstream 217202 72239918 ~ 72269866 (+)
mettl13 LOC106613973 coding upstream 247554 72235213 ~ 72239514 (+)
myoc LOC106613972 coding upstream 258887 72219897 ~ 72228181 (+)
LOC110524512 NA coding downstream 342038 72829316 ~ 72830580 (+)
LOC110524513 LOC106560217 coding downstream 346619 72833897 ~ 72851314 (+)
LOC110524516 LOC106560230 coding downstream 387907 72875185 ~ 72918731 (+)
LOC110524519 LOC106560231 coding downstream 520579 73007857 ~ 73052550 (+)
LOC118964641 NA coding downstream 550001 73037279 ~ 73040402 (+)
G436391 NA non-coding upstream 2182 72484666 ~ 72484886 (+)
G436383 NA non-coding upstream 10133 72476736 ~ 72476935 (+)
G436375 NA non-coding upstream 15950 72470915 ~ 72471118 (+)
G436372 NA non-coding upstream 19652 72467216 ~ 72467416 (+)
G436368 NA non-coding upstream 23751 72463081 ~ 72463317 (+)
G436405 NA non-coding downstream 28309 72515587 ~ 72515838 (+)
G436406 NA non-coding downstream 28587 72515865 ~ 72516088 (+)
G436408 NA non-coding downstream 31116 72518394 ~ 72518594 (+)
G436409 NA non-coding downstream 37300 72524578 ~ 72524811 (+)
G436416 NA non-coding downstream 59877 72547155 ~ 72547354 (+)
ralgps2 LOC106613957 other upstream 799899 71552653 ~ 71687963 (+)
G434829 NA other upstream 1188168 71298615 ~ 71298900 (+)
G434792 LOC106613943 other upstream 1263490 71218789 ~ 71223578 (+)
G434653 NA other upstream 1527136 70959610 ~ 70959932 (+)
LOC110524423 LOC106613476 other upstream 4272964 68212224 ~ 68214236 (+)
G436403 NA other downstream 16182 72503460 ~ 72504435 (+)
G436588 NA other downstream 508221 72995499 ~ 72995735 (+)
G437327 NA other downstream 969023 73456301 ~ 73495084 (+)
LOC110524560 LOC106560270 other downstream 2275926 74729349 ~ 74770168 (+)
G438719 NA other downstream 2284731 74772009 ~ 74776469 (+)

Expression


Co-expression Network