G436416


Basic Information

Item Value
gene id G436416
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 72547155 ~ 72547354 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU494115
gttccctctccaccccatctctgtagttccctctccacccctatttctgtagttccctctccaccccctatcACTGAagttccctctccaccccctatctctgtagttccctctccactcctatctctgtagttccctctccACTCCTATCACTGaagttccctctccaccccttatctctgtagttccctctccacccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU494115 True 200 lncRNA 0.54 1 72547155 72547354

Neighbor

gene id symbol gene type direction distance location
LOC110524509 LOC106613979 coding upstream 153705 72377782 ~ 72393450 (+)
LOC110524510 LOC106613977 coding upstream 169573 72362852 ~ 72377582 (+)
LOC110524507 LOC106613976 coding upstream 277289 72239918 ~ 72269866 (+)
mettl13 LOC106613973 coding upstream 307641 72235213 ~ 72239514 (+)
myoc LOC106613972 coding upstream 318974 72219897 ~ 72228181 (+)
LOC110524512 NA coding downstream 281962 72829316 ~ 72830580 (+)
LOC110524513 LOC106560217 coding downstream 286543 72833897 ~ 72851314 (+)
LOC110524516 LOC106560230 coding downstream 327831 72875185 ~ 72918731 (+)
LOC110524519 LOC106560231 coding downstream 460503 73007857 ~ 73052550 (+)
LOC118964641 NA coding downstream 489925 73037279 ~ 73040402 (+)
G436409 NA non-coding upstream 22344 72524578 ~ 72524811 (+)
G436408 NA non-coding upstream 28561 72518394 ~ 72518594 (+)
G436406 NA non-coding upstream 31067 72515865 ~ 72516088 (+)
G436405 NA non-coding upstream 31317 72515587 ~ 72515838 (+)
G436392 NA non-coding upstream 59877 72487068 ~ 72487278 (+)
G436423 NA non-coding downstream 8077 72555431 ~ 72555636 (+)
G436431 NA non-coding downstream 25855 72573209 ~ 72573505 (+)
G436432 NA non-coding downstream 26418 72573772 ~ 72574091 (+)
G436442 NA non-coding downstream 46386 72593740 ~ 72593949 (+)
G436445 NA non-coding downstream 52632 72599986 ~ 72600186 (+)
G436403 NA other upstream 42720 72503460 ~ 72504435 (+)
ralgps2 LOC106613957 other upstream 859986 71552653 ~ 71687963 (+)
G434829 NA other upstream 1248255 71298615 ~ 71298900 (+)
G434792 LOC106613943 other upstream 1323577 71218789 ~ 71223578 (+)
G434653 NA other upstream 1587223 70959610 ~ 70959932 (+)
G436588 NA other downstream 448145 72995499 ~ 72995735 (+)
G437327 NA other downstream 908947 73456301 ~ 73495084 (+)
LOC110524560 LOC106560270 other downstream 2215850 74729349 ~ 74770168 (+)
G438719 NA other downstream 2224655 74772009 ~ 74776469 (+)
LOC110524571 LOC106560285 other downstream 2623950 75161317 ~ 75178287 (+)

Expression


Co-expression Network