G436830 (LOC106605384)



Basic Information


Item Value
gene id G436830
gene name LOC106605384
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 72588284 ~ 72588576 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU494572
GGTGACAACTCCATGGTGTTCTACTCCCAGATTGCAAAGAACCTtggtgtgaccctggacaacactctgtcgttctctgcaaacatcaaagcagtgactcgctcctgcaggtacAACATcagtagagtacgaccctacctcacacaggaagctgcgcaggtcctaatccaggcacttgtcatctcccgtctagCCTACTGCAACTCTGTTGGTTGGgttccccgcttgtgccatcaaacccctgaaaCTTATCCAGAACACCTCAGCCAGCCTGGTGTTCTACCTTCcaaagt

Function


NR:

description
PREDICTED: uncharacterized protein LOC106604997, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU494572 True 293 TUCP 0.52 1 72588284 72588576
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110524508 LOC106613974 coding downstream 228413 72275458 ~ 72359871 (-)
LOC118964719 NA coding downstream 315535 72271876 ~ 72272749 (-)
LOC110522996 NA coding downstream 353073 72232164 ~ 72235211 (-)
LOC110524500 NA coding downstream 527870 72059571 ~ 72060414 (-)
prdx6 LOC106584278 coding downstream 556237 72022726 ~ 72032047 (-)
LOC110524515 LOC106560227 coding upstream 263492 72852068 ~ 72866268 (-)
LOC110524517 LOC106560232 coding upstream 416679 73005255 ~ 73010401 (-)
LOC110524518 LOC106560233 coding upstream 465268 73051611 ~ 73062414 (-)
LOC110524520 LOC106560236 coding upstream 517463 73106039 ~ 73109903 (-)
LOC110524523 LOC106560237 coding upstream 543526 73132102 ~ 73163431 (-)
G436821 NA non-coding downstream 12532 72575448 ~ 72575752 (-)
G436818 NA non-coding downstream 18438 72569642 ~ 72569846 (-)
G436807 NA non-coding downstream 32477 72555413 ~ 72555807 (-)
G436801 NA non-coding downstream 39568 72547435 ~ 72548716 (-)
G436800 NA non-coding downstream 42283 72545770 ~ 72546001 (-)
G436833 NA non-coding upstream 8648 72597224 ~ 72597463 (-)
G436838 NA non-coding upstream 22736 72611312 ~ 72611524 (-)
G436845 NA non-coding upstream 57332 72645908 ~ 72646269 (-)
G436848 NA non-coding upstream 86542 72675118 ~ 72675324 (-)
G436849 NA non-coding upstream 87983 72676559 ~ 72676763 (-)
G436172 LOC100136696 other downstream 466587 72040962 ~ 72121697 (-)
il23r LOC106613945 other downstream 1301292 71285725 ~ 71308015 (-)
LOC110524478 LOC106613944 other downstream 1357695 71226012 ~ 71242283 (-)
G435176 NA other downstream 1519397 71068025 ~ 71068887 (-)
G435234 NA other downstream 1596486 70990892 ~ 70991798 (-)
G436842 NA other upstream 27720 72616296 ~ 72616944 (-)
G436847 NA other upstream 83578 72672154 ~ 72672826 (-)
G436873 NA other upstream 185985 72774561 ~ 72775868 (-)
G437054 NA other upstream 506218 73094794 ~ 73095336 (-)
G437074 NA other upstream 533536 73122112 ~ 73125038 (-)

Expression


G436830(LOC106605384) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 40.
End of interactive chart.

G436830(LOC106605384) Expression in each Bioproject

Bar chart with 14 bars.
G436830(LOC106605384) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 600.
End of interactive chart.

Co-expression Network