XLOC_023527 (prkag2a)


Basic Information

Item Value
gene id XLOC_023527
gene name prkag2a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 28252520 ~ 28381437 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046527
TTTCCAAACCAAGCATGGATTGGTATCCTTTTACATTCTCTCTGTCACACATGCGGTTTTAAAGGcttgtattcacacacacatacacacacactgacactcacactcacacacagctgCACTTGACAGTCTGCAGCCGGCCGTCCATTGAAACAGAAACAACAGGGGGAATTAAAGGAAGAAACTGAAGAACTCTGGAGTAAGGACTTTACTTGAAGAGACTGGAGTAACACTTGAAGACACTGGTGTATTGATTGGGTGATAGTGATCCAGGGTCTGGCAGTAACTGAAGAGATCCAGCTAAATCATCTGTGTGTTCGGCATGAGCTGCTCTGCTCTCCGTTGGCACCCATGAAACGCTTCAGCAGCCTGAGGGGAGCTAAAAAACGGAAGGACCAAGAAGGACGGACTGGAAGACGGCAATCAGAGCCGCACGGCCTCCTCAGAACCACATCTGGCATCTCCTCATCACCCACCACTCCAACACAACTGACCAAGCAGACTTCAGCGTTTCTTGTGGAAGTCAGTCGAAATGACACAGTGCACCGCTCCTCGTCCTCGCCTCTCGACACGGGACAGCCCCACAGTCCACCCACTGCAAAACCACCACCATGTCCCTCCTCAGCACCCATATCTACCTCACGCACAGTTCACGGTTTATCTGAAGATATGCTGGAGAAACTCGATATCGAGGATGAAGCTGTTGAACATTCTGAGAGCGACATTTACATGCGGTTTATGAAGTCACATAAGTGCTATGACATCGTCCCTACCAGCTCCAAACTTGTGGTCTTTGACACAACGCTGCAGGTTAAAAAGGCCTTTTTTGCATTGGTGGCCAATGGAGTCCGAGCCGCCCCTCTGTGGGAGACTAAGAAACAGAGTTTTGTGGGCATGTTAACCATCACAGACTTCATTAACATCCTTCACAGATACTACAAATCGCCCATGGTACAAATCTATGAGCTTGAAGAGCATAAAATTGAGACATGGAGAGagCTCTATCTACAAGAAACATTTAAGCCTTTAGTGAACATATCTCCAGATGCAAGCATATTTGATGCTGTGTATTCACTGATCAAAAACAAGATCCACCGGCTGCCCGTCATCGACCCCGTCAGTGGAAATGCACTTTACATTTTGACGCACAAAAGGATCCTGAAATTCCTTCAGCTGTTTGTTTGTGAGATGCCAAAGCCCGCCTTTATGAAGCAGACACTGGAGGAGCTGAGCATCGGGACCTACAACAACATTGCCTTCATTCACCCCGACACTCCAATCATCAAAGCACTCAGCATCTTTGTGGACAGAAGAGTGTCTGCACTGCCTGTGGTGGATGAGTCGGgaAAAGTTGTAGATATTTATTCCAAGTTTGATGTCATTAATCTTGCTGCTGAAAAGACGTACAACAACCTGGACATTAGCGTGACGCAGGCGCTGATGCACAGGTCACAGTACTTTGAAGGGGTCATGAAGTGCAACAGATTGGAGACACTGGAAACAATAGTCGATCGCATAGTCAAGGCTGAGGTGCACAGGCTGGTGGTGGTAGATGAGAACGGCAGCATCGTGGGCATCGTCTCTTTGTCAGACATCCTCCAAGCACTCGTTCTCAACCCCGCAGGTATGTTAGGTAAGGACAGTGAAGCGGAGGCTGAGTGAAAAGTGATGAAAGTCTACGTGACGGTGCTGTCAGAGAAGACGACGACGACAATGATGATCACAAGTTTGGCCCACATCTCCGAATGAAACCAGATAACTTGACCAAGATGTGTGCTGTTGGAGGGAGAAAAAAAGAAGTGTCAATGGGTAAACAGACGGGTTGTTTTATCACAAACGGGCGATTTAAATGGATCATCTCTTATTCAGAAGGAAACTGTGAACTCTATTATATCACACTACGCTTCTGCACGCACACTACAACTATACTTTTAGCTAGACCTAAAATCGCGCCATCTGGTGTCTGAGCAGTGCTTGCACACAGACTACAGCCCGTACCATAATCGCCTCTTTCGAGGGGGGTGTCTGTGCGTCTGCAGGGCATTCAGTAATAATCTCAGTATTCAGTGCATGTTATGACTGTTTGTTCCTCGTGTATATACGGTTTTCAGCTTGTGGCGTATGAGCCCGGATCACATATTTGTACTTTTGACTACTCCTGAATTTAGGATCTGGTTTTGTCTCTCCTTCGCGATCCCTTTGTAAACGCAGACAGAAATGGTTTCCTCCTCTTTATCTGTCTATGGTGCCTTCTGTCCAGCAGTTATCGCCCACTACTGGTTGCCAATAGATCAAGATTAACTGAATGTTGATATCAAAGCGAATGTTGCAgttgttttaaaaagaagaaataacaACCAAAACCCCCCCTTTTTTGCCGTTTTAGTGTGTGTGTCACGACTTTTATTTATTGCAGAGCTCTACACTTCTTCACTTTGGGTGTTCATCTTGATGTTTTTGTTTGAAATGATGCTGTAAATGAtaattgaaatgtttatttatttatatttaacactTTTGTAATTTTGGAAGCGATAACCAAGCGTGAGATGGAAAGAGTTGTTGAGCCCCTATGCAGTAAAACCATGTGCTGGTCAAGGACTTGATGTTCAATGCAATTCAACCTTAAAAATCCCACTGTTGTTTTTAGTTTGCGTTCAGTCCACGAGGTGACCGACCTCTTGTTTGTATCGATTGTACTGTACACATACACGCGCAGAGGTTCTGTCTGAGGACTCTACAAGTGCCAGAGAAAGGTCTATTTTTCTGTGTGTTCAACGTTGTTTGTAAAGCATTTCATTTTAAGTTGTTTTCCGCAGAACTGTCACTGCTGTTGTCATGAGAGAGTAATGTCCAGAGATACTGTAATTGCACATCACTGGCATGAGGATGCTAATGGATAATCATGCTTtagatttctttttcattttatggttaaataattaaaaaaagaataaacaaagtGTCTAGAAACGGA
>TCONS_00046528
GCCTTCAAACACGGACTGTCACTGCCAGGACCGATGGACTTAAAAACATGAGCACTTAGTTTACTTCCACCTCCGTGATTCGCTTTTTGTTGCGTCCGATTGTAGACTACTGTATCTTTATTAGACTGACCGCGAACTTCCGATCTCCGCGGTCTCCTCAGCGTCTGTCCGCcggtgtaaaagtgtgtgtgtttgtgtggaggaCAGCCTGAGATCGCCTCGTCTGAGCTCCACTCTGTCATCTTTCCACAGGTTCACGGTTTATCTGAAGATATGCTGGAGAAACTCGATATCGAGGATGAAGCTGTTGAACATTCTGAGAGCGACATTTACATGCGGTTTATGAAGTCACATAAGTGCTATGACATCGTCCCTACCAGCTCCAAACTTGTGGTCTTTGACACAACGCTGCAGGTTAAAAAGGCCTTTTTTGCATTGGTGGCCAATGGAGTCCGAGCCGCCCCTCTGTGGGAGACTAAGAAACAGAGTTTTGTGGGCATGTTAACCATCACAGACTTCATTAACATCCTTCACAGATACTACAAATCGCCCATGGTACAAATCTATGAGCTTGAAGAGCATAAAATTGAGACATGGAGAGagCTCTATCTACAAGAAACATTTAAGCCTTTAGTGAACATATCTCCAGATGCAAGCATATTTGATGCTGTGTATTCACTGATCAAAAACAAGATCCACCGGCTGCCCGTCATCGACCCCGTCAGTGGAAATGCACTTTACATTTTGACGCACAAAAGGATCCTGAAATTCCTTCAGCTGTTTGTTTGTGAGATGCCAAAGCCCGCCTTTATGAAGCAGACACTGGAGGAGCTGAGCATCGGGACCTACAACAACATTGCCTTCATTCACCCCGACACTCCAATCATCAAAGCACTCAGCATCTTTGTGGACAGAAGAGTGTCTGCACTGCCTGTGGTGGATGAGTCGGgaAAAGTTGTAGATATTTATTCCAAGTTTGATGTCATTAATCTTGCTGCTGAAAAGACGTACAACAACCTGGACATTAGCGTGACGCAGGCGCTGATGCACAGGTCACAGTACTTTGAAGGGGTCATGAAGTGCAACAGATTGGAGACACTGGAAACAATAGTCGATCGCATAGTCAAGGCTGAGGTGCACAGGCTGGTGGTGGTAGATGAGAACGGCAGCATCGTGGGCATCGTCTCTTTGTCAGACATCCTCCAAGCACTCGTTCTCAACCCCGCAGGTATGTTAGGTAAGGACAGTGAAGCGGAGGCTGAGTGAAAAGTGATGAAAGTCTACGTGACGGTGCTGTCAGAGAAGACGACGACGACAATGATGATCACAAGTTTGGCCCACATCTCCGAATGAAACCAGATAACTTGACCAAGATGTGTGCTGTTGGAGGGAGAAAAAAAGAAGTGTCAATGGGTAAACAGACGGGTTGTTTTATCACAAACGGGCGATTTAAATGGATCATCTCTTATTCAGAAGGAAACTGTGAACTCTATTATATCACACTACGCTTCTGCACGCACACTACAACTATACTTTTAGCTAGACCTAAAATCGCGCCATCTGGTGTCTGAGCAGTGCTTGCACACAGACTACAGCCCGTACCATAATCGCCTCTTTCGAGGGGGGTGTCTGTGCGTCTGCAGGGCATTCAGTAATAATCTCAGTATTCAGTGCATGTTATGACTGTTTGTTCCTCGTGTATATACGGTTTTCAGCTTGTGGCGTATGAGCCCGGATCACATATTTGTACTTTTGACTACTCCTGAATTTAGGATCTGGTTTTGTCTCTCCTTCGCGATCCCTTTGTAAACGCAGACAGAAATGGTTTCCTCCTCTTTATCTGTCTATGGTGCCTTCTGTCCAGCAGTTATCGCCCACTACTGGTTGCCAATAGATCAAGATTAACTGAATGTTGATATCAAAGCGAATGTTGCAgttgttttaaaaagaagaaataacaACCAAAACCCCCCCTTTTTTGCCGTTTTAGTGTGTGTGTCACGACTTTTATTTATTGCAGAGCTCTACACTTCTTCACTTTGGGTGTTCATCTTGATGTTTTTGTTTGAAATGATGCTGTAAATGAtaattgaaatgtttatttatttatatttaacactTTTGTAATTTTGGAAGCGATAACCAAGCGTGAGATGGAAAGAGTTGTTGAGCCCCTATGCAGTAAAACCATGTGCTGGTCAAGGACTTGATGTTCAATGCAATTCAACCTTAAAAATCCCACTGTTGTTTTTAGTTTGCGTTCAGTCCACGAGGTGACCGACCTCTTGTTTGTATCGATTGTACTGTACACATACACGCGCAGAGGTTCTGTCTGAGGACTCTACAAGTGCCAGAGAAAGGTCTATTTTTCTGTGTGTTCAACGTTGTTTGTAAAGCATTTCATTTTAAGTTGTTTTCCGCAGAACTGTCACTGCTGTTGTCATGAGAGAGTAATGTCCAGAGATACTGTAATTGCACATCACTGGCATGAGGATGCTAATGGATAATCATGCTTtagatttctttttcattttatggttaaataattaaaaaaagaataaacaaagtGTCTAGAAA
>TCONS_00046529
AACGGCAGCATCGTGGGCATCGTCTCTTTGTCAGACATCCTCCAAGCACTCGTTCTCAACCCCGCAGGTATAAATGCTCAGCATTCCTAAAGCTCATTTCCAGCAGGACCCTTCTCCTCCCAACCTCTCTCGCCCACAACACAGGTATGTTAGGTAAGGACAGTGAAGCGGAGGCTGAGTGAAAAGTGATGAAAGTCTACGTGACGGTGCTGTCAGAGAAGACGACGACGACAATGATGATCACAAGTTTGGCCCACATCTCCGAATGAAACCAGATAACTTGACCAAGATGTGTGCTGTTGGAGGGAGAAAAAAAGAAGTGTCAATGGGTAAACAGACGGGTTGTTTTATCACAAACGGGCGATTTAAATGGATCATCTCTTATTCAGAAGGAAACTGTGAACTCTATTATATCACACTACGCTTCTGCACGCACACTACAACTATACTTTTAGCTAGACCTAAAATCGCGCCATCTGGTGTCTGAGCAGTGCTTGCACACAGACTACAGCCCGTACCATAATCGCCTCTTTCGAGGGGGGTGTCTGTGCGTCTGCAGGGCATTCAGTAATAATCTCAGTATTCAGTGCATGTTATGACTGTTTGTTCCTCGTGTATATACGGTTTTCAGCTTGTGGCGTATGAGCCCGGATCACATATTTGTACTTTTGACTACTCCTGAATTTAGGATCTGGTTTTGTCTCTCCTTCGCGATCCCTTTGTAAACGCAGACAGAAATGGTTTCCTCCTCTTTATCTGTCTATGGTGCCTT
>TCONS_00046530
cactcacactcacacacagctgCACTTGACAGTCTGCAGCCGGCCGTCCATTGAAACAGAAACAACAGGGGGAATTAAAGGAAGAAACTGAAGAACTCTGGAGTAAGGACTTTACTTGAAGAGACTGGAGTAACACTTGAAGACACTGGTGTATTGATTGGGTGATAGTGATCCAGGGTCTGGCAGTAACTGAAGAGATCCAGCTAAATCATCTGTGTGTTCGGCATGAGCTGCTCTGCTCTCCGTTGGCACCCATGAAACGCTTCAGCAGCCTGAGGGGAGCTAAAAAACGGAAGGACCAAGAAGGACGGACTGGAAGACGGCAATCAGAGCCGCACGGCCTCCTCAGAACCACATCTGGCATCTCCTCATCACCCACCACTCCAACACAACTGACCAAGCAGACTTCAGCGTTTCTTGTGGAAGTCAGTCGAAATGACACAGTGCACCGCTCCTCGTCCTCGCCTCTCGACACGGGACAGCCCCACAGTCCACCCACTGCAAAACCACCACCATGTCCCTCCTCAGCACCCATATCTACCTCACGCACAGTTCACGGTTTATCTGAAGATATGCTGGAGAAACTCGATATCGAGGATGAAGCTGTTGAACATTCTGAGAGCGACATTTACATGCGGTTTATGAAGTCACATAAGTGCTATGACATCGTCCCTACCAGCTCCAAACTTGTGGTCTTTGACACAACGCTGCAGGTTAAAAAGGCCTTTTTTGCATTGGTGGCCAATGGAGTCCGAGCCGCCCCTCTGTGGGAGACTAAGAAACAGAGTTTTGTGGGCATGTTAACCATCACAGACTTCATTAACATCCTTCACAGATACTACAAATCGCCCATGGTACAAATCTATGAGCTTGAAGAGCATAAAATTGAGACATGGAGAG
>TCONS_00046531
agcAGCAGAGCATCTCATTCCCTTCATCTCTGCTGATCCGCGCATGCAAGTTTGTTTTTACACCGAGGGCGCACGTGTTTGTTTTTCTGAAACCGAAGGAAAAGCCGTAGGAATCGAGAAATATACTATTAACTTAAGTAGCCGATTATATTTCTGTTGCTCTCATATGCTGGAGCGATGGCTTTTATTCTGGTTTCCAGCGTTAAATAAGCCTTTGCCAAAGAACAAAACCATTATTTTGGGAAATGGGCAGCACTGCAATGGATTCTAAGAAAAAAGATGAGAAGAAAAATACAAGAAAGAGGATATCGCTTCGGATAAACATGCCTGACTTGAGCTCCTTCGCCATGCCGTTCCTGGAAGGAGATGCAGAACATGCCTGTAAGGACGGCGCACGCAAGGGGGATCTTGGCTGTCGTTCAGCCAGCCCGACCAAAACCTTCTTCAGCAGGGGTCCATTTAGTCGCCCCTCCAGCCCCATGTCTGCTCCAGCCCGGACCAGAACCAGCCCAGGATCTCCCAAACCCATCTTCTCCAACCACGAGTCCTCCCCCAAGTGTTCACGGCGCCGCAGCTTCACCGGGATCTTCCGCTCATCCTCCAAAGACTCCACCAATCCCTCCACATCACCAGTCAGCATCAAACTCTTCTCCAGGACCAGGAAAGCATCTGGCATCTCCTCATCACCCACCACTCCAACACAACTGACCAAGCAGACTTCAGCGTTTCTTGTGGAAGTCAGTCGAAATGACACAGTGCACCGCTCCTCGTCCTCGCCTCTCGACACGGGACAGCCCCACAGTCCACCCACTGCAAAACCACCACCATGTCCCTCCTCAGCACCCATATCTACCTCACGCACAGTTCACGGTTTATCTGAAGATATGCTGGAGAAACTCGATATCGAGGATGAAGCTGTTGAACATTCTGAGAGCGACATTTACATGCGGTTTATGAAGTCACATAAGTGCTATGACATCGTCCCTACCAGCTCCAAACTTGTGGTCTTTGACACAACGCTGCA
>TCONS_00046532
CGCGAGCACTGATgctccacacacacgcacagcagcAGCAGAGCATCTCATTCCCTTCATCTCTGCTGATCCGCGCATGCAAGTTTGTTTTTACACCGAGGGCGCACGTGTTTGTTTTTCTGAAACCGAAGGAAAAGCCGTAGGAATCGAGAAATATACTATTAACTTAAGTAGCCGATTATATTTCTGTTGCTCTCATATGCTGGAGCGATGGCTTTTATTCTGGTTTCCAGCGTTAAATAAGCCTTTGCCAAAGAACAAAACCATTATTTTGGGAAATGGGCAGCACTGCAATGGATTCTAAGAAAAAAGATGAGAAGAAAAATACAAGAAAGAGGATATCGCTTCGGATAAACATGCCTGACTTGAGCTCCTTCGCCATGCCGTTCCTGGAAGGAGATGCAGAACATGCCTGTAAGGACGGCGCACGCAAGGTAATTGAACCTAAAgcctaaaaatgaaataaataaataaccgcTGTGAGTGATGTATTAAGATCCATTCACTACATGGAAGGTTGCCAACCTTCCATGTGGTGTTTGATATATttgataaacagttgaagtcacaattattagccctcctgtttaacATTTCTTTAAAGATCTCCAATGACAAAACAGTGGTATGTCAGTGGTGTCTCATGTCCTCTTATAAAATAATATAGCCATCTATTATACAATCGTCCATCGGCTAGGAATTCAAATCCTGAGTTGTGAAGGggaaaattaagaaattaaatttttgtCTTTCAATATACATTCTCCAAAAACACCCATAGAGGATTGTAGAAATGCCAGAAATCATCTGATTTCTTGACGCAAGACATAAGTCAGTCTTTCagcttaaagtacaatttaaaggcttaactaggttaattaggcaagctaaTTGGac

Function

symbol description
prkag2a Predicted to enable AMP binding activity; protein kinase binding activity; and protein kinase regulator activity. Predicted to be involved in cellular response to glucose starvation; protein phosphorylation; and regulation of catalytic activity. Predicted to act upstream of or within regulation of protein serine/threonine kinase activity. Predicted to be part of nucleotide-activated protein kinase complex. Predicted to be active in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in Wolff-Parkinson-White syndrome; glycogen storage disease; hypertrophic cardiomyopathy 6; and lethal congenital glycogen storage disease of heart. Orthologous to human PRKAG2 (protein kinase AMP-activated non-catalytic subunit gamma 2).

GO:

id name namespace
GO:0042149 cellular response to glucose starvation biological_process
GO:0071900 regulation of protein serine/threonine kinase activity biological_process
GO:0006468 protein phosphorylation biological_process
GO:0050790 regulation of catalytic activity biological_process
GO:0031588 nucleotide-activated protein kinase complex cellular_component
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0019887 protein kinase regulator activity molecular_function
GO:0019901 protein kinase binding molecular_function
GO:0016208 AMP binding molecular_function
GO:0004679 AMP-activated protein kinase activity molecular_function
GO:0032559 adenyl ribonucleotide binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060929-160 Predicted to enable AMP binding activity; protein kinase binding activity; and protein kinase regulator activity. Predicted to be involved in cellular response to glucose starvation; protein phosphorylation; and regulation of catalytic activity. Predicted to act upstream of or within regulation of protein serine/threonine kinase activity. Predicted to be part of nucleotide-activated protein kinase complex. Predicted to be active in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in Wolff-Parkinson-White syndrome; glycogen storage disease; hypertrophic cardiomyopathy 6; and lethal congenital glycogen storage disease of heart. Orthologous to human PRKAG2 (protein kinase AMP-activated non-catalytic subunit gamma 2).

Ensembl:

ensembl_id ENSDARG00000012625

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046527 False 2977 mRNA 0.45 14 28252520 28333126
TCONS_00046528 False 2577 mRNA 0.44 12 28252524 28306484
TCONS_00046529 False 772 mRNA 0.46 2 28253245 28259127
TCONS_00046530 False 900 mRNA 0.49 7 28268300 28333029
TCONS_00046531 False 1024 mRNA 0.50 6 28293304 28381404
TCONS_00046532 True 897 lncRNA 0.39 2 28364632 28381437

Neighbor

gene id symbol gene type direction distance location
XLOC_023526 cox4i1l coding downstream 6648 28231602 ~ 28245872 (-)
XLOC_023525 bcl2a coding downstream 22902 28137210 ~ 28229618 (-)
XLOC_023524 NA coding downstream 137156 28081388 ~ 28115364 (-)
XLOC_023523 NA coding downstream 301316 27908955 ~ 27951204 (-)
XLOC_023522 hs6st1b coding downstream 373338 27783946 ~ 27879182 (-)
XLOC_023528 nrros coding upstream 29526 28410963 ~ 28419444 (-)
XLOC_023529 fbxo45 coding upstream 44463 28425900 ~ 28437833 (-)
XLOC_023530 NA coding upstream 171130 28552567 ~ 28561226 (-)
XLOC_023531 tecrl2a coding upstream 262981 28644418 ~ 28649360 (-)
XLOC_023532 olfm3a coding upstream 304850 28686287 ~ 28711176 (-)
XLOC_023665 dre-mir-735 misc upstream 9796524 38177961 ~ 38178027 (-)
XLOC_023521 NA non-coding downstream 475706 27756876 ~ 27776814 (-)
XLOC_023520 NA non-coding downstream 761323 27489815 ~ 27491197 (-)
XLOC_023518 NA non-coding downstream 788069 27463561 ~ 27464451 (-)
XLOC_023534 CT961047.1 non-coding upstream 590647 28972084 ~ 28974899 (-)
XLOC_023536 CR388050.3 non-coding upstream 653187 29034624 ~ 29034740 (-)
XLOC_023537 CR388050.1 non-coding upstream 671271 29052708 ~ 29052826 (-)
XLOC_023538 CR847965.1 non-coding upstream 1092419 29473856 ~ 29473975 (-)

Expression


Co-expression Network