G436460


Basic Information

Item Value
gene id G436460
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 72688566 ~ 72689256 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU494160
tttctgtctctgagctagtgaagatgtttctgtctctgagccggtgaagatgtttctgtctctgagctagtggaggtgtttctgtctctgagctgatggacatgtttctgtctctgagctggtggacatgtttctgtctctgagctggtggagatgtttctgtctgagctggtggagatgtttctgtctctgagctagtggagatgtttatgtctctgagctagtgaatatttttctgtctctgagctggtgaagatgtttctgcctctgagcttgtggacatgtttccatctttgagctagtggagatgtttctgtctctgagctggtgaagatgtttctgtctctgagctggtgaagatgtttctgtctcttagctggtgcagatgtttctgtcccttagctggtgaagatgtttctgtctctgagctggtggggatgtttctgtctctgagctggtggacatgtttctgtccctgagctagtggaaatgtttctgtctctgagctagtggagatgtttctctctgagatggtggggatgttattgtctctgagctggtggggacttttctgtctctgagctggtgaagatgtttctgtctctgagctggtggacatgtttctgtctctgagctagtggagatgtttctgtctctgagctggtgaagatgtttctgtctctgagctagt

Function

NR:

description
PREDICTED: uncharacterized protein LOC106604086 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU494160 True 691 lncRNA 0.47 1 72688566 72689256

Neighbor

gene id symbol gene type direction distance location
LOC110524509 LOC106613979 coding upstream 295116 72377782 ~ 72393450 (+)
LOC110524510 LOC106613977 coding upstream 310984 72362852 ~ 72377582 (+)
LOC110524507 LOC106613976 coding upstream 418700 72239918 ~ 72269866 (+)
mettl13 LOC106613973 coding upstream 449052 72235213 ~ 72239514 (+)
myoc LOC106613972 coding upstream 460385 72219897 ~ 72228181 (+)
LOC110524512 NA coding downstream 140060 72829316 ~ 72830580 (+)
LOC110524513 LOC106560217 coding downstream 144641 72833897 ~ 72851314 (+)
LOC110524516 LOC106560230 coding downstream 185929 72875185 ~ 72918731 (+)
LOC110524519 LOC106560231 coding downstream 318601 73007857 ~ 73052550 (+)
LOC118964641 NA coding downstream 348023 73037279 ~ 73040402 (+)
G436459 NA non-coding upstream 11863 72676471 ~ 72676703 (+)
G436458 NA non-coding upstream 19501 72668810 ~ 72669065 (+)
G436456 NA non-coding upstream 63838 72622914 ~ 72624728 (+)
G436455 NA non-coding upstream 73218 72615070 ~ 72615348 (+)
G436451 NA non-coding upstream 79032 72609195 ~ 72609534 (+)
G436461 NA non-coding downstream 1568 72690824 ~ 72691066 (+)
G436462 NA non-coding downstream 12614 72701870 ~ 72702450 (+)
G436473 NA non-coding downstream 56907 72746163 ~ 72748501 (+)
G436516 LOC106560227 non-coding downstream 169550 72858806 ~ 72861016 (+)
G436592 NA non-coding downstream 308932 72998188 ~ 72998413 (+)
G436403 NA other upstream 184131 72503460 ~ 72504435 (+)
ralgps2 LOC106613957 other upstream 1001397 71552653 ~ 71687963 (+)
G434829 NA other upstream 1389666 71298615 ~ 71298900 (+)
G434792 LOC106613943 other upstream 1464988 71218789 ~ 71223578 (+)
G434653 NA other upstream 1728634 70959610 ~ 70959932 (+)
G436588 NA other downstream 306243 72995499 ~ 72995735 (+)
G437327 NA other downstream 767045 73456301 ~ 73495084 (+)
LOC110524560 LOC106560270 other downstream 2073948 74729349 ~ 74770168 (+)
G438719 NA other downstream 2082753 74772009 ~ 74776469 (+)
LOC110524571 LOC106560285 other downstream 2482048 75161317 ~ 75178287 (+)

Expression


Co-expression Network