G436850


Basic Information

Item Value
gene id G436850
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 72688695 ~ 72689182 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU494592
gtccaccagctcagagacagaaacatcttcaccagctcagagacagaaaagtccccaccagctcagagacaataacatccccaccatctcagagagaaacatctccactagctcagagacagaaacatttccactagctcagggacagaaacatgtccaccagctcagagacagaaacatccccaccagctcagagacagaaacatcttcaccagctaagggacagaaacatctgcaccagctaagagacagaaacatcttcaccagctcagagacagaaacatcttcaccagctcagagacagaaacatctccactagctcaaagatggaaacatgtccacaagctcagaggcagaaacatcttcaccagctcagagacagaaaaatattcactagctcagagacataaacatctccactagctcagagacagaaacatctccaccagctcagacagaaacatctccaccagctcagagacagaaac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106604086 isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU494592 True 488 lncRNA 0.47 1 72688695 72689182

Neighbor

gene id symbol gene type direction distance location
LOC110524508 LOC106613974 coding downstream 328824 72275458 ~ 72359871 (-)
LOC118964719 NA coding downstream 415946 72271876 ~ 72272749 (-)
LOC110522996 NA coding downstream 453484 72232164 ~ 72235211 (-)
LOC110524500 NA coding downstream 628281 72059571 ~ 72060414 (-)
prdx6 LOC106584278 coding downstream 656648 72022726 ~ 72032047 (-)
LOC110524515 LOC106560227 coding upstream 162886 72852068 ~ 72866268 (-)
LOC110524517 LOC106560232 coding upstream 316073 73005255 ~ 73010401 (-)
LOC110524518 LOC106560233 coding upstream 364662 73051611 ~ 73062414 (-)
LOC110524520 LOC106560236 coding upstream 416857 73106039 ~ 73109903 (-)
LOC110524523 LOC106560237 coding upstream 442920 73132102 ~ 73163431 (-)
G436849 NA non-coding downstream 11932 72676559 ~ 72676763 (-)
G436848 NA non-coding downstream 13371 72675118 ~ 72675324 (-)
G436845 NA non-coding downstream 42426 72645908 ~ 72646269 (-)
G436838 NA non-coding downstream 77171 72611312 ~ 72611524 (-)
G436833 NA non-coding downstream 91232 72597224 ~ 72597463 (-)
G436851 NA non-coding upstream 607 72689789 ~ 72690383 (-)
G436856 NA non-coding upstream 52087 72741269 ~ 72746273 (-)
G436857 NA non-coding upstream 52578 72741760 ~ 72744555 (-)
G436896 NA non-coding upstream 125945 72815127 ~ 72871343 (-)
G436903 LOC106560217 non-coding upstream 137263 72826445 ~ 72828605 (-)
G436847 NA other downstream 15869 72672154 ~ 72672826 (-)
G436842 NA other downstream 71751 72616296 ~ 72616944 (-)
G436830 LOC106605384 other downstream 100119 72588284 ~ 72588576 (-)
G436172 LOC100136696 other downstream 566998 72040962 ~ 72121697 (-)
il23r LOC106613945 other downstream 1401703 71285725 ~ 71308015 (-)
G436873 NA other upstream 85379 72774561 ~ 72775868 (-)
G437054 NA other upstream 405612 73094794 ~ 73095336 (-)
G437074 NA other upstream 432930 73122112 ~ 73125038 (-)
G437079 NA other upstream 457176 73146358 ~ 73147128 (-)
LOC110524526 LOC106584218 other upstream 681426 73370439 ~ 73421683 (-)

Expression


Co-expression Network