G436462


Basic Information

Item Value
gene id G436462
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 72701870 ~ 72702450 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU494162
agatgttactgcctctgagctggtggggatgtttctgtctctgagctggtggacatgtttctctctctgagctagtggaaatgtttctgtctctgagctagtggagatgtttctgtctctgagctgatggggATGTtaatgtctctgagctgatggacatgtttctgtctctgagctggtggacatgtttctatctctgagctggtggaaatgtttctgtctctgagctggtggagatgtttctgtctctgagctggtgaagatgtttctgtctctgagcttgtggggatttttctgtctctgagctggagaagatgtttctgcctctgagcttgtggacatgtttccatctttgagctagtggagatgtttctgtctctgagctggtgaagatgtttctgtctctgagctggtgaagatgtttctgtctcttagctggtgcagatgtttctgtcccttagctggtgaagatatttctgtctctgagctggtggggatgtttctgtctctgagctggtgaagatgtttctgtctctgagctggtggacatgtttctgtctctgagctagtggagatgtttc

Function

NR:

description
PREDICTED: proline-rich protein 9-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU494162 True 581 lncRNA 0.47 1 72701870 72702450

Neighbor

gene id symbol gene type direction distance location
LOC110524509 LOC106613979 coding upstream 308420 72377782 ~ 72393450 (+)
LOC110524510 LOC106613977 coding upstream 324288 72362852 ~ 72377582 (+)
LOC110524507 LOC106613976 coding upstream 432004 72239918 ~ 72269866 (+)
mettl13 LOC106613973 coding upstream 462356 72235213 ~ 72239514 (+)
myoc LOC106613972 coding upstream 473689 72219897 ~ 72228181 (+)
LOC110524512 NA coding downstream 126866 72829316 ~ 72830580 (+)
LOC110524513 LOC106560217 coding downstream 131447 72833897 ~ 72851314 (+)
LOC110524516 LOC106560230 coding downstream 172735 72875185 ~ 72918731 (+)
LOC110524519 LOC106560231 coding downstream 305407 73007857 ~ 73052550 (+)
LOC118964641 NA coding downstream 334829 73037279 ~ 73040402 (+)
G436461 NA non-coding upstream 10804 72690824 ~ 72691066 (+)
G436460 NA non-coding upstream 12614 72688566 ~ 72689256 (+)
G436459 NA non-coding upstream 25167 72676471 ~ 72676703 (+)
G436458 NA non-coding upstream 32805 72668810 ~ 72669065 (+)
G436456 NA non-coding upstream 77142 72622914 ~ 72624728 (+)
G436473 NA non-coding downstream 43713 72746163 ~ 72748501 (+)
G436516 LOC106560227 non-coding downstream 156356 72858806 ~ 72861016 (+)
G436592 NA non-coding downstream 295738 72998188 ~ 72998413 (+)
G436595 NA non-coding downstream 298328 73000778 ~ 73000997 (+)
G436606 NA non-coding downstream 353450 73055900 ~ 73056733 (+)
G436403 NA other upstream 197435 72503460 ~ 72504435 (+)
ralgps2 LOC106613957 other upstream 1014701 71552653 ~ 71687963 (+)
G434829 NA other upstream 1402970 71298615 ~ 71298900 (+)
G434792 LOC106613943 other upstream 1478292 71218789 ~ 71223578 (+)
G434653 NA other upstream 1741938 70959610 ~ 70959932 (+)
G436588 NA other downstream 293049 72995499 ~ 72995735 (+)
G437327 NA other downstream 753851 73456301 ~ 73495084 (+)
LOC110524560 LOC106560270 other downstream 2060754 74729349 ~ 74770168 (+)
G438719 NA other downstream 2069559 74772009 ~ 74776469 (+)
LOC110524571 LOC106560285 other downstream 2468854 75161317 ~ 75178287 (+)

Expression


Co-expression Network