G436595


Basic Information

Item Value
gene id G436595
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 73000778 ~ 73000997 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU494313
gcgttgtcttggctgtgtgcttagggtcattgttctgttggaaggtgaaccttcgccccagtctgaggtcttgagcaccctggagcaggttttcatcaaggatctctctgtactttgctctgttcatctttccctcgatcctgactagtctcccagtccatgccactgaaaaacatccacaaagcatgatgctgccaccaccatgcttcaccttagggat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU494313 True 220 lncRNA 0.50 1 73000778 73000997

Neighbor

gene id symbol gene type direction distance location
LOC110524516 LOC106560230 coding upstream 82047 72875185 ~ 72918731 (+)
LOC110524513 LOC106560217 coding upstream 149464 72833897 ~ 72851314 (+)
LOC110524511 LOC106560226 coding upstream 170198 72473117 ~ 72830580 (+)
LOC110524512 NA coding upstream 170198 72829316 ~ 72830580 (+)
LOC110524509 LOC106613979 coding upstream 607328 72377782 ~ 72393450 (+)
LOC110524519 LOC106560231 coding downstream 6860 73007857 ~ 73052550 (+)
LOC118964641 NA coding downstream 36282 73037279 ~ 73040402 (+)
LOC110522997 dhcr24 coding downstream 92653 73093650 ~ 73103407 (+)
LOC110524521 LOC106560235 coding downstream 112323 73113320 ~ 73118094 (+)
mdp1 mgdp1 coding downstream 125635 73126632 ~ 73129571 (+)
G436592 NA non-coding upstream 2365 72998188 ~ 72998413 (+)
G436516 LOC106560227 non-coding upstream 139762 72858806 ~ 72861016 (+)
G436473 NA non-coding upstream 252277 72746163 ~ 72748501 (+)
G436462 NA non-coding upstream 298328 72701870 ~ 72702450 (+)
G436461 NA non-coding upstream 309712 72690824 ~ 72691066 (+)
G436606 NA non-coding downstream 54903 73055900 ~ 73056733 (+)
G436610 NA non-coding downstream 64503 73065500 ~ 73065729 (+)
G436613 NA non-coding downstream 72319 73073316 ~ 73073692 (+)
G436631 NA non-coding downstream 102636 73103633 ~ 73104048 (+)
G436630 NA non-coding downstream 104127 73105124 ~ 73106233 (+)
G436588 NA other upstream 5043 72995499 ~ 72995735 (+)
G436403 NA other upstream 496343 72503460 ~ 72504435 (+)
ralgps2 LOC106613957 other upstream 1313609 71552653 ~ 71687963 (+)
G434829 NA other upstream 1701878 71298615 ~ 71298900 (+)
G434792 LOC106613943 other upstream 1777200 71218789 ~ 71223578 (+)
G437327 NA other downstream 455304 73456301 ~ 73495084 (+)
LOC110524560 LOC106560270 other downstream 1762207 74729349 ~ 74770168 (+)
G438719 NA other downstream 1771012 74772009 ~ 74776469 (+)
LOC110524571 LOC106560285 other downstream 2170307 75161317 ~ 75178287 (+)
G441903 NA other downstream 4267215 77268212 ~ 77268766 (+)

Expression


Co-expression Network