Gene
RNA
| Item | Value |
|---|---|
| gene id | G436982 |
| gene name | usp24 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 73041083 ~ 73041743 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| usp24 | Predicted to enable cysteine-type endopeptidase activity and thiol-dependent deubiquitinase. Acts upstream of or within central nervous system morphogenesis and cranial skeletal system development. Predicted to be active in cytosol and nucleus. Orthologous to human USP24 (ubiquitin specific peptidase 24). |
| description |
|---|
| LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 24-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU494737 | False | 661 | lncRNA | 0.54 | 1 | 73041083 | 73041743 |
| TU494736 | True | 254 | lncRNA | 0.60 | 1 | 73041490 | 73041743 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524517 | LOC106560232 | coding | downstream | 30682 | 73005255 ~ 73010401 (-) |
| LOC110524515 | LOC106560227 | coding | downstream | 174815 | 72852068 ~ 72866268 (-) |
| LOC110524508 | LOC106613974 | coding | downstream | 681212 | 72275458 ~ 72359871 (-) |
| LOC118964719 | NA | coding | downstream | 768334 | 72271876 ~ 72272749 (-) |
| LOC110522996 | NA | coding | downstream | 805872 | 72232164 ~ 72235211 (-) |
| LOC110524518 | LOC106560233 | coding | upstream | 12101 | 73051611 ~ 73062414 (-) |
| LOC110524520 | LOC106560236 | coding | upstream | 64296 | 73106039 ~ 73109903 (-) |
| LOC110524523 | LOC106560237 | coding | upstream | 90359 | 73132102 ~ 73163431 (-) |
| LOC110524524 | LOC100194696 | coding | upstream | 132963 | 73174706 ~ 73180889 (-) |
| LOC110522885 | LOC106560352 | coding | upstream | 146282 | 73188025 ~ 73188938 (-) |
| G437024 | NA | non-coding | downstream | 24 | 73040543 ~ 73041059 (-) |
| G437020 | NA | non-coding | downstream | 2288 | 73035911 ~ 73038795 (-) |
| G437022 | NA | non-coding | downstream | 5929 | 73034903 ~ 73035154 (-) |
| G436927 | NA | non-coding | downstream | 168862 | 72871982 ~ 72872221 (-) |
| G436904 | NA | non-coding | downstream | 210517 | 72829457 ~ 72830566 (-) |
| G436981 | LOC107697547 | non-coding | upstream | 173 | 73041916 ~ 73042771 (-) |
| G437016 | NA | non-coding | upstream | 2136 | 73043879 ~ 73045499 (-) |
| G437029 | NA | non-coding | upstream | 5213 | 73046956 ~ 73051290 (-) |
| G437028 | LOC106585657 | non-coding | upstream | 7320 | 73049063 ~ 73050363 (-) |
| G436873 | NA | other | downstream | 265215 | 72774561 ~ 72775868 (-) |
| G436847 | NA | other | downstream | 368257 | 72672154 ~ 72672826 (-) |
| G436842 | NA | other | downstream | 424139 | 72616296 ~ 72616944 (-) |
| G436830 | LOC106605384 | other | downstream | 452507 | 72588284 ~ 72588576 (-) |
| G436172 | LOC100136696 | other | downstream | 919386 | 72040962 ~ 72121697 (-) |
| G437054 | NA | other | upstream | 53051 | 73094794 ~ 73095336 (-) |
| G437074 | NA | other | upstream | 80369 | 73122112 ~ 73125038 (-) |
| G437079 | NA | other | upstream | 104615 | 73146358 ~ 73147128 (-) |
| LOC110524526 | LOC106584218 | other | upstream | 328865 | 73370439 ~ 73421683 (-) |
| G439002 | NA | other | upstream | 1823516 | 74865259 ~ 74927797 (-) |
