G437079


Basic Information

Item Value
gene id G437079
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 73146358 ~ 73147128 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU494857
gagatacagatgaagaaagagagagagaaacagatgggCAGATggactgtcagagagagagaaacggatgGGCAGATGgattgtcagagagagaggcatgttcccagagaaagagagagaaacagatgggCAGATggactgtcagagagagaggcacgttcccagagagagagagagagaaacagatgggCAGATggactgtcagagagagaggcacgttcccagagagagagagagaaacagatgggCAGATggactgtcagagagagaggcacgttcccagagagagagagagaaacagatgggCAGATggactgtcagagagagaggcacgttcccagagagagagagagaaacagatgggCAGATggactgtcagagagagaggcatgttcccagagagagagaaacagatgggCAGATggactgtcagagagagaggcacattcccagagagagagagagaaacagatgggCAAATggactgtcagagagagaggcacgttcccagagagagagagagaaacagatgggCAA
>TU494858
gagatacagatgaagaaagagagagagaaacagatgggCAGATggactgtcagagagagagaaacggatgGGCAGATGgattgtcagagagagaggcatgttcccagagaaagagagagaaacagatgggCAGATggactgtcagagagagaggcacgttcccagagagagagagagagaaacagatgggCAGATggactgtcagagagagagGCAcgttcccagagagagagagagaaacagatgggCAGATggactgtcagagagagaggcacgttcccagagagagagagagagagagacagatgggcagatggactgtcagagagagaggcacgttcccagagagagagagagaaacagatgggCAGATggactgtcagagagagaggcacgttcccagagagagagagagaaacagatgggCAGATggactgtcagagagagaggcacgttcccagagagagagagagaaacagatgggCAGATggactgtcagagagagaggcatgttcccagagagagagaaacagatgggCAGATggactgtcagagagagaggcacattcccagagagagagagagaaacagatgggCAAATggactgtcagagagagaggcacgttcccagagagagagagagaaacagatgggCAA
>TU494859
gagatacagatgaagaaagagagagagaaacagatgggCAGATggactgtcagagagagagaaacggatgGGCAGATGgattgtcagagagagaggcatgttcccagagaaagagagagaaacagatgggCAGATggactgtcagagagagaggcacgttcccagagagagagagagagaaacagatgggCAGATggactgtcagagagagaggcacGTTcccagagattgagagatgggcagatggactgtcagagagagaggcacgttcccagagagagagagagaaacagatgggCAGATggactgtcagagagagaggcacgttcccagagagagagagagaaacagatgggCAGATggactgtcagagagagaggcacgttcccagagagagagagagaaacagatgggCAGATggactgtcagagagagaggcatgttcccagagagagagaaacagatgggCAGATggactgtcagagagagaggcacattcccagagagagagagagaaacagatgggCAAATggactgtcagagagagaggcacgttcccagagagagagagagaaacagatgggCAA

Function

NR:

description
nipped-B-like protein B isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU494857 False 537 TUCP 0.51 2 73146358 73147128
TU494858 False 657 TUCP 0.52 2 73146358 73147128
TU494859 True 587 TUCP 0.52 3 73146358 73147128

Neighbor

gene id symbol gene type direction distance location
LOC110524520 LOC106560236 coding downstream 36455 73106039 ~ 73109903 (-)
LOC110524518 LOC106560233 coding downstream 83944 73051611 ~ 73062414 (-)
LOC110524517 LOC106560232 coding downstream 135957 73005255 ~ 73010401 (-)
LOC110524515 LOC106560227 coding downstream 280090 72852068 ~ 72866268 (-)
LOC110524508 LOC106613974 coding downstream 786487 72275458 ~ 72359871 (-)
LOC110524524 LOC100194696 coding upstream 27578 73174706 ~ 73180889 (-)
LOC110522885 LOC106560352 coding upstream 40897 73188025 ~ 73188938 (-)
LOC100135942 LOC106560239 coding upstream 60732 73207860 ~ 73218158 (-)
LOC110524526 LOC106584218 coding upstream 223311 73370439 ~ 73421683 (-)
LOC110524527 LOC106560250 coding upstream 284435 73431563 ~ 73444514 (-)
G437075 NA non-coding downstream 19994 73125420 ~ 73126364 (-)
G437073 LOC106567308 non-coding downstream 24331 73121401 ~ 73122027 (-)
G437069 NA non-coding downstream 31506 73114613 ~ 73114852 (-)
G437067 NA non-coding downstream 32629 73113458 ~ 73113729 (-)
G437066 NA non-coding downstream 33026 73113122 ~ 73113332 (-)
LOC110524523 LOC106560237 non-coding upstream 8514 73132102 ~ 73163431 (-)
G437318 NA non-coding upstream 293116 73440244 ~ 73440536 (-)
G437660 LOC106560248 non-coding upstream 339539 73486667 ~ 73488455 (-)
G437680 cc2d2a non-coding upstream 384480 73531608 ~ 73532196 (-)
G437705 NA non-coding upstream 446966 73594094 ~ 73594489 (-)
G437074 NA other downstream 21320 73122112 ~ 73125038 (-)
G437054 NA other downstream 51022 73094794 ~ 73095336 (-)
G436873 NA other downstream 370490 72774561 ~ 72775868 (-)
G436847 NA other downstream 473532 72672154 ~ 72672826 (-)
G436842 NA other downstream 529414 72616296 ~ 72616944 (-)
G439002 NA other upstream 1718131 74865259 ~ 74927797 (-)
LOC110523004 NA other upstream 1816332 74961377 ~ 74968484 (-)
G439594 NA other upstream 2116345 75263473 ~ 75265403 (-)
G439788 LOC106560295 other upstream 2424121 75571249 ~ 75575569 (-)

Expression


Co-expression Network