G437934



Basic Information


Item Value
gene id G437934
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 74034303 ~ 74034613 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU495863
agCATGCACTTGGTCGtctatagcctataggctatggatcatttgtttgagaccacactaaatagcctataggctacggatcatttgattgagaccacactaaatagcctataggcagCATTGGGCGCACATTgatatatagcctaataagcaactgattataaaacactgagaaatatagAAATGTCACCAATTACAAAtaacatgaccctcccctggactagatttGAAAAAAACGAAACTCTTTCCTCTTtccttgactgaaattgaaaaatcATGACCATTCTGTAAATGTAGATCCATCTCTTACA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU495863 True 311 lncRNA 0.37 1 74034303 74034613

Neighbor


gene id symbol gene type direction distance location
sgcb LOC106560263 coding downstream 18265 74009042 ~ 74016038 (-)
LOC110524549 LOC106560259 coding downstream 25734 73993983 ~ 74008569 (-)
ociad2 ocad2 coding downstream 62173 73969591 ~ 73972130 (-)
fryl NA coding downstream 80426 73850914 ~ 73953877 (-)
LOC118964642 LOC106560258 coding downstream 186544 73844674 ~ 73847759 (-)
LOC110523002 LOC106560265 coding upstream 27615 74062228 ~ 74075591 (-)
LOC110524553 LOC106560266 coding upstream 87690 74122303 ~ 74354093 (-)
LOC110524556 LOC106560268 coding upstream 371233 74405846 ~ 74501105 (-)
LOC118964644 kdr coding upstream 772593 74807206 ~ 74820307 (-)
LOC100135915 LOC106560272 coding upstream 814217 74848830 ~ 74891311 (-)
G437933 NA non-coding downstream 1707 74032244 ~ 74032596 (-)
G437929 NA non-coding downstream 10660 74023431 ~ 74023643 (-)
G437926 NA non-coding downstream 12762 74021333 ~ 74021541 (-)
G437924 NA non-coding downstream 15131 74018971 ~ 74019172 (-)
G437945 NA non-coding upstream 20388 74055001 ~ 74059582 (-)
G437952 NA non-coding upstream 32513 74067126 ~ 74067497 (-)
G437953 NA non-coding upstream 33339 74067952 ~ 74068427 (-)
G437954 NA non-coding upstream 34922 74069535 ~ 74069879 (-)
G437991 NA non-coding upstream 74830 74109443 ~ 74109667 (-)
LOC110524526 LOC106584218 other downstream 623964 73370439 ~ 73421683 (-)
G437079 NA other downstream 887175 73146358 ~ 73147128 (-)
G437074 NA other downstream 909265 73122112 ~ 73125038 (-)
G437054 NA other downstream 938967 73094794 ~ 73095336 (-)
G436873 NA other downstream 1258435 72774561 ~ 72775868 (-)
G439002 NA other upstream 830646 74865259 ~ 74927797 (-)
LOC110523004 NA other upstream 928847 74961377 ~ 74968484 (-)
G439594 NA other upstream 1228860 75263473 ~ 75265403 (-)
G439788 LOC106560295 other upstream 1536636 75571249 ~ 75575569 (-)
G441168 glrx2 other upstream 2551845 76586458 ~ 76590370 (-)

Expression



Co-expression Network