G437953



Basic Information


Item Value
gene id G437953
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 74067952 ~ 74068427 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU495885
cagtagtcaaacctagaagtaacaaacaatgttgttgacccatcctcagttttctcctatcacagctgttaaactctttaactgttttaaagtcactattggcctcatggtgaaatccctgagcggtttccgtcctctctggcaactgagttaggaaggacgcctgtatcgttGTACTGACTGgatatattgatacaccatcgaaagtgtaataacttcaccatgctgaaagggatattcaatttctgcttttatttattttgactcATCTACCAATATTTGcctttctttgtgaggcattggacaacctccctggtctttgtggttgagtctgtgtttgaaattcactgctccaTTGATGGACCTTACAATGATCtgaatgtgtggggtacagagatgaggtagtcattcaaaaatcatgttaaacactattattgcacagagtccatgcaacttattgagTGACTTGTtaggca

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU495885 True 476 lncRNA 0.40 1 74067952 74068427

Neighbor


gene id symbol gene type direction distance location
sgcb LOC106560263 coding downstream 51914 74009042 ~ 74016038 (-)
LOC110524549 LOC106560259 coding downstream 59383 73993983 ~ 74008569 (-)
ociad2 ocad2 coding downstream 95822 73969591 ~ 73972130 (-)
fryl NA coding downstream 114075 73850914 ~ 73953877 (-)
LOC118964642 LOC106560258 coding downstream 220193 73844674 ~ 73847759 (-)
LOC110524553 LOC106560266 coding upstream 53876 74122303 ~ 74354093 (-)
LOC110524556 LOC106560268 coding upstream 337419 74405846 ~ 74501105 (-)
LOC118964644 kdr coding upstream 738779 74807206 ~ 74820307 (-)
LOC100135915 LOC106560272 coding upstream 780403 74848830 ~ 74891311 (-)
LOC110522887 LOC106560273 coding upstream 833130 74901557 ~ 74911349 (-)
G437952 NA non-coding downstream 455 74067126 ~ 74067497 (-)
G437945 NA non-coding downstream 8370 74055001 ~ 74059582 (-)
G437934 NA non-coding downstream 33339 74034303 ~ 74034613 (-)
G437933 NA non-coding downstream 35356 74032244 ~ 74032596 (-)
G437929 NA non-coding downstream 44309 74023431 ~ 74023643 (-)
G437954 NA non-coding upstream 1108 74069535 ~ 74069879 (-)
G437991 NA non-coding upstream 41016 74109443 ~ 74109667 (-)
G437992 NA non-coding upstream 41581 74110008 ~ 74110237 (-)
G438307 NA non-coding upstream 141371 74209798 ~ 74217446 (-)
G438409 NA non-coding upstream 372423 74440850 ~ 74445900 (-)
LOC110524526 LOC106584218 other downstream 657613 73370439 ~ 73421683 (-)
G437079 NA other downstream 920824 73146358 ~ 73147128 (-)
G437074 NA other downstream 942914 73122112 ~ 73125038 (-)
G437054 NA other downstream 972616 73094794 ~ 73095336 (-)
G436873 NA other downstream 1292084 72774561 ~ 72775868 (-)
G439002 NA other upstream 796832 74865259 ~ 74927797 (-)
LOC110523004 NA other upstream 895033 74961377 ~ 74968484 (-)
G439594 NA other upstream 1195046 75263473 ~ 75265403 (-)
G439788 LOC106560295 other upstream 1502822 75571249 ~ 75575569 (-)
G441168 glrx2 other upstream 2518031 76586458 ~ 76590370 (-)

Expression



Co-expression Network