G438410



Basic Information


Item Value
gene id G438410
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 74446103 ~ 74450669 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU496405
gttgtgtttagttcagtatgacgTCAGTGGggatgtgtttagttcagtatgatgtcagtgggggttgtgtttagttcagtatgacgtcagtgggggttgtgtttagttcaggaTGACGTCAGCaagggttgtgtttagttcagtatgatgtcagtggggatgtgtttagttcagtatgatgtCAGTGGGGGTGGTGTTTAGTTCAGCATGAAGTCAgcgggggttgtgtttagttcagtatgaagtcagtgggggttgtgtttagttcagtttgAAGTCAGTGAGGGTTGTGCTTTGTTCAGTATGATGTCAGTGGGGGTTGTGTTCAGTTCAGTACATAGTCAGCaggggttgtgtttagtttcaTTTTGAAGTCAGTAGGGGTGGTGTTTTGTTCAGTATGAAGTCAGTGGGGGTGTGTTCA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU496405 True 424 lncRNA 0.45 2 74446103 74450669

Neighbor


gene id symbol gene type direction distance location
LOC110524553 LOC106560266 coding downstream 92010 74122303 ~ 74354093 (-)
LOC110523002 LOC106560265 coding downstream 370512 74062228 ~ 74075591 (-)
sgcb LOC106560263 coding downstream 430065 74009042 ~ 74016038 (-)
LOC110524549 LOC106560259 coding downstream 437534 73993983 ~ 74008569 (-)
ociad2 ocad2 coding downstream 473973 73969591 ~ 73972130 (-)
LOC118964644 kdr coding upstream 356537 74807206 ~ 74820307 (-)
LOC100135915 LOC106560272 coding upstream 398161 74848830 ~ 74891311 (-)
LOC110522887 LOC106560273 coding upstream 450888 74901557 ~ 74911349 (-)
LOC110523004 NA coding upstream 510708 74961377 ~ 74968484 (-)
LOC110524565 LOC106560282 coding upstream 575939 75026608 ~ 75036101 (-)
G438409 NA non-coding downstream 203 74440850 ~ 74445900 (-)
G438307 NA non-coding downstream 228657 74209798 ~ 74217446 (-)
G437992 NA non-coding downstream 335866 74110008 ~ 74110237 (-)
G437991 NA non-coding downstream 336436 74109443 ~ 74109667 (-)
G437954 NA non-coding downstream 376224 74069535 ~ 74069879 (-)
G438424 NA non-coding upstream 18436 74469105 ~ 74469898 (-)
G438447 NA non-coding upstream 65292 74515961 ~ 74516300 (-)
G438452 NA non-coding upstream 70157 74520826 ~ 74521029 (-)
G438553 NA non-coding upstream 146495 74597164 ~ 74597493 (-)
G438554 NA non-coding upstream 147313 74597982 ~ 74598214 (-)
LOC110524526 LOC106584218 other downstream 1035764 73370439 ~ 73421683 (-)
G437079 NA other downstream 1298975 73146358 ~ 73147128 (-)
G437074 NA other downstream 1321065 73122112 ~ 73125038 (-)
G437054 NA other downstream 1350767 73094794 ~ 73095336 (-)
G436873 NA other downstream 1670235 72774561 ~ 72775868 (-)
G439002 NA other upstream 414590 74865259 ~ 74927797 (-)
G439594 NA other upstream 812804 75263473 ~ 75265403 (-)
G439788 LOC106560295 other upstream 1120580 75571249 ~ 75575569 (-)
G441168 glrx2 other upstream 2135789 76586458 ~ 76590370 (-)

Expression



Co-expression Network