Gene
RNA
| Item | Value |
|---|---|
| gene id | G438424 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 74469105 ~ 74469898 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| aggrecan core protein-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU496422 | True | 547 | lncRNA | 0.51 | 2 | 74469105 | 74469898 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524553 | LOC106560266 | coding | downstream | 115012 | 74122303 ~ 74354093 (-) |
| LOC110523002 | LOC106560265 | coding | downstream | 393514 | 74062228 ~ 74075591 (-) |
| sgcb | LOC106560263 | coding | downstream | 453067 | 74009042 ~ 74016038 (-) |
| LOC110524549 | LOC106560259 | coding | downstream | 460536 | 73993983 ~ 74008569 (-) |
| ociad2 | ocad2 | coding | downstream | 496975 | 73969591 ~ 73972130 (-) |
| LOC118964644 | kdr | coding | upstream | 337308 | 74807206 ~ 74820307 (-) |
| LOC100135915 | LOC106560272 | coding | upstream | 378932 | 74848830 ~ 74891311 (-) |
| LOC110522887 | LOC106560273 | coding | upstream | 431659 | 74901557 ~ 74911349 (-) |
| LOC110523004 | NA | coding | upstream | 491479 | 74961377 ~ 74968484 (-) |
| LOC110524565 | LOC106560282 | coding | upstream | 556710 | 75026608 ~ 75036101 (-) |
| G438410 | NA | non-coding | downstream | 18436 | 74446103 ~ 74450669 (-) |
| G438409 | NA | non-coding | downstream | 23205 | 74440850 ~ 74445900 (-) |
| G438307 | NA | non-coding | downstream | 251659 | 74209798 ~ 74217446 (-) |
| G437992 | NA | non-coding | downstream | 358868 | 74110008 ~ 74110237 (-) |
| G437991 | NA | non-coding | downstream | 359438 | 74109443 ~ 74109667 (-) |
| G438447 | NA | non-coding | upstream | 46063 | 74515961 ~ 74516300 (-) |
| G438452 | NA | non-coding | upstream | 50928 | 74520826 ~ 74521029 (-) |
| G438553 | NA | non-coding | upstream | 127266 | 74597164 ~ 74597493 (-) |
| G438554 | NA | non-coding | upstream | 128084 | 74597982 ~ 74598214 (-) |
| G438568 | NA | non-coding | upstream | 140352 | 74610250 ~ 74610861 (-) |
| LOC110524526 | LOC106584218 | other | downstream | 1058766 | 73370439 ~ 73421683 (-) |
| G437079 | NA | other | downstream | 1321977 | 73146358 ~ 73147128 (-) |
| G437074 | NA | other | downstream | 1344067 | 73122112 ~ 73125038 (-) |
| G437054 | NA | other | downstream | 1373769 | 73094794 ~ 73095336 (-) |
| G436873 | NA | other | downstream | 1693237 | 72774561 ~ 72775868 (-) |
| G439002 | NA | other | upstream | 395361 | 74865259 ~ 74927797 (-) |
| G439594 | NA | other | upstream | 793575 | 75263473 ~ 75265403 (-) |
| G439788 | LOC106560295 | other | upstream | 1101351 | 75571249 ~ 75575569 (-) |
| G441168 | glrx2 | other | upstream | 2116560 | 76586458 ~ 76590370 (-) |
