G438447



Basic Information


Item Value
gene id G438447
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 74515961 ~ 74516300 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU496445
gtcgTGGGTTCAAACAAACTACAATATCTCAATACAGATTAAGATAATAAACCATTCAGTTGGAGCTAGTGCAAAGTTTGACTGTATTCTAGCCTCCCACTTCTCCACCCACACTAACCAGAGGCAGACATGCCCTAGTCTCTATGTGAATATCATACTGGAAGAAAATACTTATAAACATGTCAAAATTCCGTCCCAGTAAATATTAcccagcgtccctgtggaactTAGCTCATGGAGAGATCTAAGGCTTTTTGAACAGGCGGCTAAGCGCTCACAGGAGGAGAGACTCATGAATATTTATAGCTCTTAATTCATCCAACGCTCGACAGACCTCCCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU496445 True 340 lncRNA 0.43 1 74515961 74516300

Neighbor


gene id symbol gene type direction distance location
LOC110524556 LOC106560268 coding downstream 14856 74405846 ~ 74501105 (-)
LOC110524553 LOC106560266 coding downstream 161868 74122303 ~ 74354093 (-)
LOC110523002 LOC106560265 coding downstream 440370 74062228 ~ 74075591 (-)
sgcb LOC106560263 coding downstream 499923 74009042 ~ 74016038 (-)
LOC110524549 LOC106560259 coding downstream 507392 73993983 ~ 74008569 (-)
LOC118964644 kdr coding upstream 290906 74807206 ~ 74820307 (-)
LOC100135915 LOC106560272 coding upstream 332530 74848830 ~ 74891311 (-)
LOC110522887 LOC106560273 coding upstream 385257 74901557 ~ 74911349 (-)
LOC110523004 NA coding upstream 445077 74961377 ~ 74968484 (-)
LOC110524565 LOC106560282 coding upstream 510308 75026608 ~ 75036101 (-)
G438424 NA non-coding downstream 46063 74469105 ~ 74469898 (-)
G438410 NA non-coding downstream 65292 74446103 ~ 74450669 (-)
G438409 NA non-coding downstream 70061 74440850 ~ 74445900 (-)
G438307 NA non-coding downstream 298515 74209798 ~ 74217446 (-)
G437992 NA non-coding downstream 405724 74110008 ~ 74110237 (-)
G438452 NA non-coding upstream 4526 74520826 ~ 74521029 (-)
G438553 NA non-coding upstream 80864 74597164 ~ 74597493 (-)
G438554 NA non-coding upstream 81682 74597982 ~ 74598214 (-)
G438568 NA non-coding upstream 93950 74610250 ~ 74610861 (-)
G438570 NA non-coding upstream 95095 74611395 ~ 74611651 (-)
LOC110524526 LOC106584218 other downstream 1105622 73370439 ~ 73421683 (-)
G437079 NA other downstream 1368833 73146358 ~ 73147128 (-)
G437074 NA other downstream 1390923 73122112 ~ 73125038 (-)
G437054 NA other downstream 1420625 73094794 ~ 73095336 (-)
G436873 NA other downstream 1740093 72774561 ~ 72775868 (-)
G439002 NA other upstream 348959 74865259 ~ 74927797 (-)
G439594 NA other upstream 747173 75263473 ~ 75265403 (-)
G439788 LOC106560295 other upstream 1054949 75571249 ~ 75575569 (-)
G441168 glrx2 other upstream 2070158 76586458 ~ 76590370 (-)

Expression



Co-expression Network