G438689



Basic Information


Item Value
gene id G438689
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 74703104 ~ 74703408 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU496704
tctcaggtcagggcgtgacaaacatctgattttttatggaatatctacataggcgtacagaggcccattatcagcaaccatcactcctgtgttccaatggcacgtcgtgttagctaatccaagtttatcgttTTTAAAGGctcattgatcattagaaaacccttttgcaatgatgttagcacagctgaaaactgttgttctgattaaagaagcaatataaTAAAGCaataattaaagaagcaattggagcggcaggtagcctagtggttagagcattgggtcagtaacggaaaggttgctagatc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU496704 True 305 lncRNA 0.40 1 74703104 74703408

Neighbor


gene id symbol gene type direction distance location
LOC110524556 LOC106560268 coding downstream 201999 74405846 ~ 74501105 (-)
LOC110524553 LOC106560266 coding downstream 349011 74122303 ~ 74354093 (-)
LOC110523002 LOC106560265 coding downstream 627513 74062228 ~ 74075591 (-)
sgcb LOC106560263 coding downstream 687066 74009042 ~ 74016038 (-)
LOC110524549 LOC106560259 coding downstream 694535 73993983 ~ 74008569 (-)
LOC118964644 kdr coding upstream 103798 74807206 ~ 74820307 (-)
LOC100135915 LOC106560272 coding upstream 145422 74848830 ~ 74891311 (-)
LOC110522887 LOC106560273 coding upstream 198149 74901557 ~ 74911349 (-)
LOC110523004 NA coding upstream 257969 74961377 ~ 74968484 (-)
LOC110524565 LOC106560282 coding upstream 323200 75026608 ~ 75036101 (-)
G438669 NA non-coding downstream 19058 74683836 ~ 74684046 (-)
G438657 NA non-coding downstream 34601 74665247 ~ 74668503 (-)
G438637 NA non-coding downstream 66295 74636593 ~ 74636809 (-)
G438635 NA non-coding downstream 67682 74635081 ~ 74635422 (-)
G438570 NA non-coding downstream 91453 74611395 ~ 74611651 (-)
G438692 NA non-coding upstream 1137 74704545 ~ 74704798 (-)
G438695 NA non-coding upstream 2299 74705707 ~ 74705930 (-)
G438696 NA non-coding upstream 5252 74708660 ~ 74708942 (-)
G438952 NA non-coding upstream 67059 74770467 ~ 74771392 (-)
G438957 NA non-coding upstream 71791 74775199 ~ 74776202 (-)
LOC110524526 LOC106584218 other downstream 1292765 73370439 ~ 73421683 (-)
G437079 NA other downstream 1555976 73146358 ~ 73147128 (-)
G437074 NA other downstream 1578066 73122112 ~ 73125038 (-)
G437054 NA other downstream 1607768 73094794 ~ 73095336 (-)
G436873 NA other downstream 1927236 72774561 ~ 72775868 (-)
G439002 NA other upstream 161851 74865259 ~ 74927797 (-)
G439594 NA other upstream 560065 75263473 ~ 75265403 (-)
G439788 LOC106560295 other upstream 867841 75571249 ~ 75575569 (-)
G441168 glrx2 other upstream 1883050 76586458 ~ 76590370 (-)

Expression



Co-expression Network