G438719


Basic Information

Item Value
gene id G438719
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 74772009 ~ 74776469 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU496740
aacctaaaacaccaaATATAAAAGACCAAATACACacgttgcttaccaagaagacagcgaatgttcccgagtggccgaTTTAACTTATATCAgtttggcaagacttgaaaatggctgtctagcaatgatcaacaacaaacttGACGAGGCTTGAAgatttaaaaaagaaaaatgcttataagaaattccaCTATACTCTGTGAAGACCCATTAAAGAGGCaacgcgtcaatacaggactaagattgaatcctactacaccagttCTGAcgctgtggcagggcttgcaaactattttggactacaaagggaagaccAGCTACGAGCTGCTcaatgacacaagcctaccaggcGAGCTAAAGGACTTCTATGTGCACTTcaaagcaagcaacactgaagcatgcatgagagaaaaagctgttccggacgactgtagCCGATGTAAGacgtttaaacaggtcaacattcacaaggtcacagggccagacagattatcaGGAcctgtactccgagcatgcgctgataATTCTAcacgtttcaaacagaccaccatagtccctgtgcccaagaacatcaaggtaacctgcctaaatgacttccaacactcacgtctgtagccatgaagtactttgaaaggctggtcatggctcacatcaacatcatcatcccagaaacactagacccactccaatttgcatactgccccaacatatccacagatgatgtaatctctattgcactccacactgccctttcccacctggacaaaaggaacacctatgtgagaatgctattcattgactacagctcagagttcaaaactatagtgccctcaaagctcataacTAAACTAAAGACCCTaatactaaacacctccctctgcaactggatcatggactttctgacgggccaccacgaggtggtaagggtaggttaCAATATATCTGCCACACTggtcctcaacacaggggcccctcaggggtgcgtgcttagacCCTCcggtgctccctgttcacccatgactgtgtggccaagcataactctaacacaatcattaagtttacagacgacacaatggtggtaggcctgatcaccgacaatgatgagacagtctatagggaggaggacagagacctggcagtggggtgccaggacaacaacctcacaCTCAGCATGATTAAGAATAAGGAGATGCTTGTGGACTACCGGAAAAGAAGAGCCGAGCATACCCTGATTTTTATCGacgtgtcagtgtcagtgtataATGTCTGTTTGTAACATATGTTAAAATGTGATCGTATTATaagttgtattttaatgtttaaggactccAAATGAGGACTAAAATAGATAATCACAAATCTAATCAAATCGACAGGGCtttagtggaacaggttgagaccttcaagttccttgataTCCACGTcacaaacaaactaacatggtccaaacacaccaagacagttgtgaagagggcactaaAACGTTTATTCccccacaggagactgaaaagatttggcatgagtcatCAGATtctcaaaagttctacagctgcaccatcgagagcatcctgactggttacatcactgcctggtatggcaattgctcggcctctgaccgcaatgctctacagaggatagtgcgtacggcccagtacatcactggggccaagcttcctgccatccaggacctctataccaggcggtgtcagaggaaggccctaaaaactgtcaaagactccagccaccctagtcatagactattctctctgctacctcacagcaagcggtaccggagcgtcaagtctaggtccaaaaggcttcttaacagcttctacccccaagccttaagactgctgcacatctaatcaaatgactaccacacacacacacacacactttttcccccgctgctgctactgtttattatctatgcatagtcactttacccctacctacatgtacatattacctcaattaccttgactaaactGTACCCCATCACATTgattcggtaccggtaccccctgtatatagcctcgttattattattttattgttgctattttatttattttttctctagtttattttgtaaatattttcttaactcttatttttcttaaaacctgcattgttgtttaagggcatgtaagtaaacatttcactaagGTTTCACTAACATTTCACTACATTTCACTAaggtttcacctgttgtatttggtgcatgtgacaaatacaatttgatttgatttgattctaaaTATTGCACCGTACAATCCAGATGTGCTAAACTCTTacagatttacccagaaagactcacagctgtaatcactgccaaagtttaTTCTAACGTGTTGACTCAGTGGTGTAAATAcacatgtaaatgagatatttctgtacttaattttcaatacatttgctaaaatgtctaaaaacatgttttcactttgccattatgtggtattgtgtgtagatgatggTGACAACTTGGAGAAATGTTGGGCTTAAGTGGGATGCTGAATCTTTGCAAATCTGTATTCAGATTTATTAAATTATCCTTGTTGTCCATATTAAAGGACACTTCATAAATATTGACAAATATGCACAAAATAAAtatgcacaatttctacttaaaatatcaaagggatgcaaaagtCACTGCTGTCGTGGAATGACCTAACTGTCTCTGTATGATTGTATGAAAGCACAGCATTCTCTAGCATTCTCTATTTAGTATTTTGCCCCTCGGGGTCCCAGAATATTCTAGAGCACAATGACAGATTGGACATCACAGTAGATAATTATCTTTAACTCCCATACTTAAACAGGTGAGTCTCTATAGAGACTAGCTATAGTTGCCTGTGATAGGGACCTACTCCTTTCCAGTTTTCCATAGCCTGGGCCAGGTACATCATGTTGTCTCCAACGTGAAAAATCTCTGCCTGTACTCCACTTAAATTTACAGGTGACAACAAGTAAAGAGAATATTCTGCAATGTACATGTTGATTCTCTAATGTGTATCTTCTCTTATTTTTTGGTTGATCATTCTTGAGTTTTATCGGTTTAACTGTGAGTAGTGTAGAAGGGGCTAAATGTCACATATGGGTGTGTTTGTGGCTTACCACCATTTCCCTCTTTCACCCAGCTGCTCAGGAAGCAtgtgcccctgtgtgtgtggagACTGTGTGGGGATGGGCAGTCGGCTTGGTGTGACCTGGGGGTGACACCACAGCCTGCCAGCCAGAAGCTCGAAGATATGGACACCGCAGCGGGGGTacaggagagagaaggGTGTAGGATTAGAAGTCCAGAGTGAGATGGATGACCTGGGAGGACTGGTTTTAGTTAACCCCTGGAAGCAGTGATGATAAGAGATATCGTCAGTTCATTGTGACAAGGTTAATATAACGTTGCCATCTGAACTTTGACCTCTCATCCCAGGCTTGACAGCTGGGTGTTCCGTCAAACTAGATCTGGGCCCCATGGGAACCTGGCTGGCTTTCCACACAGTCGGCTCATTTTCATGGACCTGAACCAAGCATTTGAGATTAGATTAAAGTGCGGTATGTGTTGAGAGAGATTGTGTTGACAGGCAGAATTCACACAAGGAATCCTTGTGTTGCTGAGTTTCACATCCATTTGCCAAAAGTATattcatgtttcttataaaaGGTGTGGCACACTTTGCTGCTGTCTTATTCTGTACATTATGTTAGCATTGGTGTGTAACTGAGGCCACCATTCCATCAGGAAAACATGTTCTGTACTATTtatttcacatactgtatgtataatgtTCCGTGAGATTCATTAAATTACCATCAAACAACCGTGATATATATGCCTATGTTGTTTCTCAGTTGTCACACTAGCATTATTCAGTCAGCTGGCCAACATTAATATAGACATATGGAGCAAAAGTCTGTTTTGCTGAGAGCGTCAGCAGGAGCCTCTATATCAAACtaatataaaatattttaaagCAGCTGGTCACTTTTCATG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU496740 True 4003 TUCP 0.42 2 74772009 74776469

Neighbor

gene id symbol gene type direction distance location
LOC110524560 LOC106560270 coding upstream 1841 74729349 ~ 74770168 (+)
LOC110523003 LOC106560269 coding upstream 109560 74638146 ~ 74662449 (+)
LOC110522886 pdx1 coding upstream 141336 74628427 ~ 74630673 (+)
LOC110524557 LOC106560354 coding upstream 147420 74623051 ~ 74624589 (+)
LOC110524555 NA coding upstream 388327 74360777 ~ 74383682 (+)
LOC110524561 LOC106560271 coding downstream 58979 74835448 ~ 74841452 (+)
LOC110524562 exoc1 coding downstream 155681 74932150 ~ 74946070 (+)
LOC110523005 LOC106560277 coding downstream 195594 74972063 ~ 75017851 (+)
LOC110524564 LOC106560280 coding downstream 255320 75031789 ~ 75041377 (+)
LOC118964645 LOC106583873 coding downstream 284712 75061181 ~ 75068745 (+)
G438628 NA non-coding upstream 72912 74698822 ~ 74699097 (+)
G438623 NA non-coding upstream 80001 74691723 ~ 74692008 (+)
G438595 NA non-coding upstream 108381 74662520 ~ 74663628 (+)
G438599 NA non-coding upstream 136080 74635628 ~ 74635929 (+)
G438596 NA non-coding upstream 140293 74631486 ~ 74631716 (+)
G438807 NA non-coding downstream 124684 74901153 ~ 74902477 (+)
G438831 NA non-coding downstream 151584 74928053 ~ 74928567 (+)
G438836 NA non-coding downstream 173819 74950288 ~ 74950686 (+)
G438841 NA non-coding downstream 188899 74965368 ~ 74965605 (+)
G438904 NA non-coding downstream 320498 75096967 ~ 75099072 (+)
G437327 NA other upstream 1276925 73456301 ~ 73495084 (+)
G436588 NA other upstream 1776274 72995499 ~ 72995735 (+)
G436403 NA other upstream 2267574 72503460 ~ 72504435 (+)
ralgps2 LOC106613957 other upstream 3084840 71552653 ~ 71687963 (+)
LOC110524571 LOC106560285 other downstream 394835 75161317 ~ 75178287 (+)
G441903 NA other downstream 2491743 77268212 ~ 77268766 (+)
G442273 NA other downstream 2781861 77558330 ~ 77583227 (+)
LOC110524622 LOC106560333 other downstream 3469370 78245839 ~ 78288092 (+)
G445204 NA other downstream 5440009 80216478 ~ 80217090 (+)

Expression


Co-expression Network