Gene
RNA
| Item | Value |
|---|---|
| gene id | G439012 |
| gene name | exoc1 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 74932171 ~ 74934342 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| exoc1 | Predicted to enable phosphatidylinositol-4,5-bisphosphate binding activity. Predicted to be involved in Golgi to plasma membrane transport and exocytosis. Predicted to be part of exocyst. Predicted to be active in plasma membrane. Orthologous to human EXOC1 (exocyst complex component 1). |
| description |
|---|
| PREDICTED: exocyst complex component 1 isoform X6 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU497060 | True | 681 | lncRNA | 0.48 | 4 | 74932171 | 74934342 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522887 | LOC106560273 | coding | downstream | 20822 | 74901557 ~ 74911349 (-) |
| LOC100135915 | LOC106560272 | coding | downstream | 40860 | 74848830 ~ 74891311 (-) |
| LOC118964644 | kdr | coding | downstream | 111864 | 74807206 ~ 74820307 (-) |
| LOC110524556 | LOC106560268 | coding | downstream | 431066 | 74405846 ~ 74501105 (-) |
| LOC110524553 | LOC106560266 | coding | downstream | 578078 | 74122303 ~ 74354093 (-) |
| LOC110523004 | NA | coding | upstream | 27035 | 74961377 ~ 74968484 (-) |
| LOC110524565 | LOC106560282 | coding | upstream | 92266 | 75026608 ~ 75036101 (-) |
| LOC110524566 | NA | coding | upstream | 114103 | 75048445 ~ 75049425 (-) |
| LOC101268909 | LOC101268909 | coding | upstream | 148124 | 75082466 ~ 75091633 (-) |
| LOC110524567 | LOC106560283 | coding | upstream | 159276 | 75045027 ~ 75099520 (-) |
| G438951 | NA | non-coding | downstream | 85555 | 74844036 ~ 74846616 (-) |
| G438959 | NA | non-coding | downstream | 96066 | 74835494 ~ 74836105 (-) |
| G438957 | NA | non-coding | downstream | 155969 | 74775199 ~ 74776202 (-) |
| G438952 | NA | non-coding | downstream | 160779 | 74770467 ~ 74771392 (-) |
| G438696 | NA | non-coding | downstream | 223229 | 74708660 ~ 74708942 (-) |
| G439065 | NA | non-coding | upstream | 30419 | 74964761 ~ 74965137 (-) |
| G439076 | NA | non-coding | upstream | 58794 | 74993136 ~ 74999899 (-) |
| G439571 | NA | non-coding | upstream | 280421 | 75214763 ~ 75215003 (-) |
| G439002 | NA | other | downstream | 4374 | 74865259 ~ 74927797 (-) |
| LOC110524526 | LOC106584218 | other | downstream | 1521832 | 73370439 ~ 73421683 (-) |
| G437079 | NA | other | downstream | 1785043 | 73146358 ~ 73147128 (-) |
| G437074 | NA | other | downstream | 1807133 | 73122112 ~ 73125038 (-) |
| G437054 | NA | other | downstream | 1836835 | 73094794 ~ 73095336 (-) |
| G439594 | NA | other | upstream | 329131 | 75263473 ~ 75265403 (-) |
| G439788 | LOC106560295 | other | upstream | 636907 | 75571249 ~ 75575569 (-) |
| G441168 | glrx2 | other | upstream | 1652116 | 76586458 ~ 76590370 (-) |
| G441483 | NA | other | upstream | 1968040 | 76902382 ~ 76902771 (-) |
