G439139


Basic Information

Item Value
gene id G439139
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 75109596 ~ 75110029 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU497206
cctgggaacagtgggttaactgccttgttcaggggcagaacgacagatttgtaccttgtcagctcgggggtttgaactcgcaaccttccggttactagtccaacgctctaaccactaggctaccctgccgccccaatcggATTGGCATTCATACATTTCCATTGCGGGTCTACATGGTAGGCTACACCCCAGCAAGCACGAGCCGACGTCTTTTGGACATCGTTTTTCGGTGTTTTACAAATGGAACGCTTACCAAATAGATGAGCATTCATAAAATGTAATTTCAGGCAACACCTCAGTAAGCACTGACCAAAGCCGAAGCCTTTTGGACGTCTTTTTTTGGTGCAGTTCCAGACTGGCCTTGATTTCCACATGCACAGACATAGTTTTTTTGTCCGGTCCAGACAAAATTGAACCAATTATAAAGGTTACAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU497206 True 434 lncRNA 0.47 1 75109596 75110029

Neighbor

gene id symbol gene type direction distance location
LOC118964645 LOC106583873 coding upstream 40851 75061181 ~ 75068745 (+)
LOC110524564 LOC106560280 coding upstream 68219 75031789 ~ 75041377 (+)
LOC110523005 LOC106560277 coding upstream 91745 74972063 ~ 75017851 (+)
LOC110524562 exoc1 coding upstream 163526 74932150 ~ 74946070 (+)
LOC110524561 LOC106560271 coding upstream 268144 74835448 ~ 74841452 (+)
LOC110524571 LOC106560285 coding downstream 51288 75161317 ~ 75178287 (+)
LOC110524576 uhmk1 coding downstream 222424 75332453 ~ 75347896 (+)
rgs4 LOC106560295 coding downstream 451149 75561178 ~ 75572148 (+)
LOC118964720 LOC106576333 coding downstream 1152265 76262294 ~ 76264534 (+)
LOC110524585 LOC106560359 coding downstream 1428963 76538992 ~ 76541623 (+)
G438908 NA non-coding upstream 8147 75101201 ~ 75101449 (+)
G438904 NA non-coding upstream 10524 75096967 ~ 75099072 (+)
G438841 NA non-coding upstream 143991 74965368 ~ 74965605 (+)
G438836 NA non-coding upstream 158910 74950288 ~ 74950686 (+)
G438831 NA non-coding upstream 181029 74928053 ~ 74928567 (+)
G439210 LOC106560285 non-coding downstream 95435 75205464 ~ 75209077 (+)
G439214 NA non-coding downstream 104830 75214859 ~ 75215093 (+)
G439189 LOC106584137 non-coding downstream 110183 75220212 ~ 75224041 (+)
G439190 NA non-coding downstream 117880 75227909 ~ 75229974 (+)
G439218 NA non-coding downstream 122118 75232147 ~ 75232560 (+)
G438719 NA other upstream 333127 74772009 ~ 74776469 (+)
LOC110524560 LOC106560270 other upstream 339430 74729349 ~ 74770168 (+)
G437327 NA other upstream 1614512 73456301 ~ 73495084 (+)
G436588 NA other upstream 2113861 72995499 ~ 72995735 (+)
G436403 NA other upstream 2605161 72503460 ~ 72504435 (+)
G441903 NA other downstream 2158183 77268212 ~ 77268766 (+)
G442273 NA other downstream 2448301 77558330 ~ 77583227 (+)
LOC110524622 LOC106560333 other downstream 3135810 78245839 ~ 78288092 (+)
G445204 NA other downstream 5106449 80216478 ~ 80217090 (+)

Expression


Co-expression Network