G439214


Basic Information

Item Value
gene id G439214
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 75214859 ~ 75215093 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU497300
gtcggaggctacaccgtggacctggcaaccttggctagcgcgcactgcgcccggcctgccacaggagtcgctggtgtgcgatgagacaaggagatccctaccgaccaatccctccctaacccggacgacgctaggccaattgtgcgtcgccccacggacctcccggtcacggccggttacgacagggactctgatggcacagctggcgctgcagtacagcgcccttaaccactgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU497300 True 235 lncRNA 0.65 1 75214859 75215093

Neighbor

gene id symbol gene type direction distance location
LOC110524571 LOC106560285 coding upstream 43038 75161317 ~ 75178287 (+)
LOC118964645 LOC106583873 coding upstream 146114 75061181 ~ 75068745 (+)
LOC110524564 LOC106560280 coding upstream 173482 75031789 ~ 75041377 (+)
LOC110523005 LOC106560277 coding upstream 197008 74972063 ~ 75017851 (+)
LOC110524562 exoc1 coding upstream 268789 74932150 ~ 74946070 (+)
LOC110524576 uhmk1 coding downstream 117360 75332453 ~ 75347896 (+)
rgs4 LOC106560295 coding downstream 346085 75561178 ~ 75572148 (+)
LOC118964720 LOC106576333 coding downstream 1047201 76262294 ~ 76264534 (+)
LOC110524585 LOC106560359 coding downstream 1323899 76538992 ~ 76541623 (+)
LOC110524586 LOC106560300 coding downstream 1348396 76563489 ~ 76566464 (+)
G439210 LOC106560285 non-coding upstream 5782 75205464 ~ 75209077 (+)
G439139 NA non-coding upstream 104830 75109596 ~ 75110029 (+)
G438908 NA non-coding upstream 113410 75101201 ~ 75101449 (+)
G438904 NA non-coding upstream 115787 75096967 ~ 75099072 (+)
G438841 NA non-coding upstream 249254 74965368 ~ 74965605 (+)
G439189 LOC106584137 non-coding downstream 5119 75220212 ~ 75224041 (+)
G439190 NA non-coding downstream 12816 75227909 ~ 75229974 (+)
G439218 NA non-coding downstream 17054 75232147 ~ 75232560 (+)
G439220 NA non-coding downstream 22554 75237647 ~ 75240458 (+)
G439222 NA non-coding downstream 30639 75245732 ~ 75246005 (+)
G438719 NA other upstream 438390 74772009 ~ 74776469 (+)
LOC110524560 LOC106560270 other upstream 444693 74729349 ~ 74770168 (+)
G437327 NA other upstream 1719775 73456301 ~ 73495084 (+)
G436588 NA other upstream 2219124 72995499 ~ 72995735 (+)
G441903 NA other downstream 2053119 77268212 ~ 77268766 (+)
G442273 NA other downstream 2343237 77558330 ~ 77583227 (+)
LOC110524622 LOC106560333 other downstream 3030746 78245839 ~ 78288092 (+)
G445204 NA other downstream 5001385 80216478 ~ 80217090 (+)
G445211 NA other downstream 5019787 80234880 ~ 80235428 (+)

Expression


Co-expression Network