G439788 (LOC106560295)


Basic Information

Item Value
gene id G439788
gene name LOC106560295
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 75571249 ~ 75575569 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU497923
AAACAACAAGAAAATAAATATGAAGATGATTATTACATTGTATAATAAATATGTAGCCATCATCATTGGAGGCGAGTAGGAGTAATGTTTTAACAAAACGTACAGAACCATATAATGATATCAATAGCATTACCAATAACCATATAATGATAAAGTATCAATATGTTTTCTTCATAAGCACATCAGGAAAGGATCAGCTGAAGCAAGTCGCTGAATTGCTcaaatgggagtgtgtgtgtgtctctgtgtgtgttaggggTGGATAGAGTAGTAATTCCATATTgtttctCCCTGTGTTGTGAATCAAAACATCACCTAGTCATGACTTTGTTGTCAGGTTAACAGAAGGCCAGTGAGTTACACCTTAACAGTGCATGAACTGGCCACAGGTAAAGtaaagacagaaaaacagagtcAAACAAACAACAGTCAGGTGAAAGAAGTTTTTTAACACCAATCCATTCGGAAACTATCATCTAATTTAACACTTAGCATGGAGCCCTTGATTAAAACCAGACAGAGGGGACACAGGGAACTAGCCAGGGTGAAATACCTAAATGCTTGTTTGAACCATTTGAATATTTTTAGAGATCTGGAAGATGTTCAGTGTAAAGAAAGCAGACCCTCGCACAACAATGAAAATCAGAGAATGGAACATCCTTTCAGGAGCATATTTCTCCTGAAAAATAACTCTTGacagttctctccctctccaattgTCCCCTCGTCTCAAAAATAATCTATTTGTGATGCGTGTTGAAATGGTTATCTGGAACAATGGACAGAAAAAATAAAACCCCACCCACTCATAATAATGTTTTCTCTTCAAGACTACCTGCTCTTTCCCTCACAGATTGACAAAATGTTACACATTCTTCAATCCGtccttgtttctctctccatctccatctatGCACCACATCTGTTCTCAGAACAGACTATTTTTCCTCCTATCTTCTTCAGTGCACAGAGTGGGGTGGTGGTGCTCAACAGGGACAGATCCTGGATCAGTTTGGAGTGGAGGAACCTTCTGTATGAGTCTTTCTCCATCAAATTGAAGATCTTCTGCTGGGCGTCATTGAAACAGGATAAGCCGGCAATAGACAGGTTCTGTCTGGTCTCCTCTCGCGTTGCTGAGTCCAGG

Function

NR:

description
regulator of G-protein signaling 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU497923 True 1144 TUCP 0.40 4 75571249 75575569

Neighbor

gene id symbol gene type direction distance location
LOC110524577 LOC106560293 coding downstream 42699 75361138 ~ 75528550 (-)
LOC110524574 LOC106560290 coding downstream 237773 75299095 ~ 75333476 (-)
LOC110524573 LOC106560289 coding downstream 274641 75237541 ~ 75296608 (-)
LOC110524572 LOC105011858 coding downstream 341212 75220206 ~ 75230037 (-)
LOC118964646 NA coding downstream 343231 75225463 ~ 75228018 (-)
LOC110524579 LOC106560296 coding upstream 38021 75613590 ~ 75624467 (-)
LOC110524580 rgs16 coding upstream 82963 75658532 ~ 75660672 (-)
rgs8 LOC106560297 coding upstream 96144 75671713 ~ 75706466 (-)
LOC110523006 LOC106560358 coding upstream 164541 75740110 ~ 75743709 (-)
LOC110524582 LOC106560298 coding upstream 306660 75882229 ~ 75954489 (-)
G439691 NA non-coding downstream 144078 75426944 ~ 75427171 (-)
G439690 NA non-coding downstream 144723 75426147 ~ 75426526 (-)
G439687 NA non-coding downstream 150545 75420385 ~ 75420704 (-)
G439686 NA non-coding downstream 151695 75419340 ~ 75419554 (-)
G439685 NA non-coding downstream 152640 75418252 ~ 75418609 (-)
G439821 NA non-coding upstream 40610 75616179 ~ 75636229 (-)
G439822 NA non-coding upstream 42094 75617663 ~ 75667165 (-)
G439870 NA non-coding upstream 137993 75713562 ~ 75713846 (-)
G439875 NA non-coding upstream 143264 75718833 ~ 75719041 (-)
G439887 NA non-coding upstream 160500 75736069 ~ 75736291 (-)
G439594 NA other downstream 305846 75263473 ~ 75265403 (-)
LOC110523004 NA other downstream 607553 74961377 ~ 74968484 (-)
G439002 NA other downstream 643452 74865259 ~ 74927797 (-)
LOC110524526 LOC106584218 other downstream 2160910 73370439 ~ 73421683 (-)
G437079 NA other downstream 2424121 73146358 ~ 73147128 (-)
G441168 glrx2 other upstream 1010889 76586458 ~ 76590370 (-)
G441483 NA other upstream 1326813 76902382 ~ 76902771 (-)
G441630 NA other upstream 1438430 77013999 ~ 77021375 (-)
G442115 NA other upstream 1831173 77406742 ~ 77407135 (-)
G442381 rpl5 other upstream 2047730 77623299 ~ 77627214 (-)

Expression


Co-expression Network