G439870



Basic Information


Item Value
gene id G439870
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 75713562 ~ 75713846 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU498018
tatatatatattgtataagtccaaaaatgtatgtagcaactacagaatgcccctttaagtctatcaaaagtgtgcgagtttgagcatgtgtccattatgTCACCCCCTGATCAGTTTCGcctgtccttgttattgtctcctccccctccaggtgtcgcttgttatTCCTGATGTATATatacctgtgtttcctgtctctctgtgccagttcgtcttgtatgtttcaagtcaaccagtgtggttTTCCCGTGCTCCTGTCTTTTTCCTATTCTCTTttactagtcc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU498018 True 285 lncRNA 0.42 1 75713562 75713846

Neighbor


gene id symbol gene type direction distance location
rgs8 LOC106560297 coding downstream 7096 75671713 ~ 75706466 (-)
LOC110524580 rgs16 coding downstream 52890 75658532 ~ 75660672 (-)
LOC110524579 LOC106560296 coding downstream 89095 75613590 ~ 75624467 (-)
LOC110524577 LOC106560293 coding downstream 185012 75361138 ~ 75528550 (-)
LOC110524574 LOC106560290 coding downstream 380086 75299095 ~ 75333476 (-)
LOC110523006 LOC106560358 coding upstream 26264 75740110 ~ 75743709 (-)
LOC110524582 LOC106560298 coding upstream 168383 75882229 ~ 75954489 (-)
LOC110524583 LOC106560299 coding upstream 575075 76288921 ~ 76324868 (-)
LOC110524587 uchl5 coding upstream 864397 76578243 ~ 76586678 (-)
glrx2 glrx2 coding upstream 873159 76587005 ~ 76588980 (-)
G439822 NA non-coding downstream 46397 75617663 ~ 75667165 (-)
G439821 NA non-coding downstream 77333 75616179 ~ 75636229 (-)
G439691 NA non-coding downstream 286391 75426944 ~ 75427171 (-)
G439690 NA non-coding downstream 287036 75426147 ~ 75426526 (-)
G439687 NA non-coding downstream 292858 75420385 ~ 75420704 (-)
G439875 NA non-coding upstream 4987 75718833 ~ 75719041 (-)
G439887 NA non-coding upstream 22223 75736069 ~ 75736291 (-)
G439927 NA non-coding upstream 46152 75759998 ~ 75760201 (-)
G439929 LOC106581772 non-coding upstream 47650 75761496 ~ 75761708 (-)
G439931 NA non-coding upstream 47926 75761772 ~ 75762028 (-)
G439788 LOC106560295 other downstream 137993 75571249 ~ 75575569 (-)
G439594 NA other downstream 448159 75263473 ~ 75265403 (-)
LOC110523004 NA other downstream 749866 74961377 ~ 74968484 (-)
G439002 NA other downstream 785765 74865259 ~ 74927797 (-)
LOC110524526 LOC106584218 other downstream 2303223 73370439 ~ 73421683 (-)
G441168 glrx2 other upstream 872612 76586458 ~ 76590370 (-)
G441483 NA other upstream 1188536 76902382 ~ 76902771 (-)
G441630 NA other upstream 1300153 77013999 ~ 77021375 (-)
G442115 NA other upstream 1692896 77406742 ~ 77407135 (-)
G442381 rpl5 other upstream 1909453 77623299 ~ 77627214 (-)

Expression



Co-expression Network