G440045


Basic Information

Item Value
gene id G440045
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 75838745 ~ 75838952 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU498197
acataatacaaaacaataaacgtggcaaaaccgaaacagtcctaactggtgcagaaaacactaagacaggaaacaaccacccacaaaacccaacacaaaacaggctacctaaatatggttcccaatcagagacaatgcctaacacctgcctctgattgagaaccatatcaggccttacatagaaatagacaaacgagtcacacaacat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU498197 True 208 lncRNA 0.41 1 75838745 75838952

Neighbor

gene id symbol gene type direction distance location
rgs4 LOC106560295 coding upstream 266597 75561178 ~ 75572148 (+)
LOC110524576 uhmk1 coding upstream 490849 75332453 ~ 75347896 (+)
LOC110524571 LOC106560285 coding upstream 666924 75161317 ~ 75178287 (+)
LOC118964645 LOC106583873 coding upstream 770000 75061181 ~ 75068745 (+)
LOC110524564 LOC106560280 coding upstream 797368 75031789 ~ 75041377 (+)
LOC118964720 LOC106576333 coding downstream 423342 76262294 ~ 76264534 (+)
LOC110524585 LOC106560359 coding downstream 700040 76538992 ~ 76541623 (+)
LOC110524586 LOC106560300 coding downstream 724537 76563489 ~ 76566464 (+)
LOC110524588 LOC106560302 coding downstream 735422 76574374 ~ 76576547 (+)
LOC110524593 LOC106560306 coding downstream 771017 76609969 ~ 76639478 (+)
G439943 NA non-coding upstream 69162 75769190 ~ 75769583 (+)
G439932 NA non-coding upstream 75490 75762983 ~ 75763255 (+)
G439930 NA non-coding upstream 76718 75761806 ~ 75762027 (+)
G439928 NA non-coding upstream 77138 75761403 ~ 75761607 (+)
G439910 NA non-coding upstream 86854 75751611 ~ 75751891 (+)
G440064 NA non-coding downstream 13558 75852510 ~ 75852767 (+)
G440068 NA non-coding downstream 15059 75854011 ~ 75854335 (+)
G440071 NA non-coding downstream 16301 75855253 ~ 75855457 (+)
G440102 NA non-coding downstream 35042 75873994 ~ 75874215 (+)
G440409 NA non-coding downstream 478770 76317722 ~ 76318721 (+)
G438719 NA other upstream 1062276 74772009 ~ 74776469 (+)
LOC110524560 LOC106560270 other upstream 1068579 74729349 ~ 74770168 (+)
G437327 NA other upstream 2343661 73456301 ~ 73495084 (+)
G436588 NA other upstream 2843010 72995499 ~ 72995735 (+)
G441903 NA other downstream 1429260 77268212 ~ 77268766 (+)
G442273 NA other downstream 1719378 77558330 ~ 77583227 (+)
LOC110524622 LOC106560333 other downstream 2406887 78245839 ~ 78288092 (+)
G445204 NA other downstream 4377526 80216478 ~ 80217090 (+)
G445211 NA other downstream 4395928 80234880 ~ 80235428 (+)

Expression


Co-expression Network