G440071


Basic Information

Item Value
gene id G440071
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 75855253 ~ 75855457 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU498223
cagtaaggccattctactgccaatgtttgtctaaggagattgcatggctgtgtgctcaatttttcAGCACACTAAGACGTGTTAGCTTGGGGCAGCaggtggttggagcgttgggccagtaaccaaaaggttgctggatcgaatccccgaggtaaaaatctgttgttctggccctgaacatggcagttaacccactgttccctgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU498223 True 205 lncRNA 0.50 1 75855253 75855457

Neighbor

gene id symbol gene type direction distance location
rgs4 LOC106560295 coding upstream 283105 75561178 ~ 75572148 (+)
LOC110524576 uhmk1 coding upstream 507357 75332453 ~ 75347896 (+)
LOC110524571 LOC106560285 coding upstream 683432 75161317 ~ 75178287 (+)
LOC118964645 LOC106583873 coding upstream 786508 75061181 ~ 75068745 (+)
LOC110524564 LOC106560280 coding upstream 813876 75031789 ~ 75041377 (+)
LOC118964720 LOC106576333 coding downstream 406837 76262294 ~ 76264534 (+)
LOC110524585 LOC106560359 coding downstream 683535 76538992 ~ 76541623 (+)
LOC110524586 LOC106560300 coding downstream 708032 76563489 ~ 76566464 (+)
LOC110524588 LOC106560302 coding downstream 718917 76574374 ~ 76576547 (+)
LOC110524593 LOC106560306 coding downstream 754512 76609969 ~ 76639478 (+)
G440068 NA non-coding upstream 918 75854011 ~ 75854335 (+)
G440064 NA non-coding upstream 2486 75852510 ~ 75852767 (+)
G440045 NA non-coding upstream 16301 75838745 ~ 75838952 (+)
G439943 NA non-coding upstream 85670 75769190 ~ 75769583 (+)
G439932 NA non-coding upstream 91998 75762983 ~ 75763255 (+)
G440102 NA non-coding downstream 18537 75873994 ~ 75874215 (+)
G440409 NA non-coding downstream 462265 76317722 ~ 76318721 (+)
G440795 NA non-coding downstream 509080 76364537 ~ 76364839 (+)
G440856 NA non-coding downstream 549748 76405205 ~ 76405445 (+)
G440877 NA non-coding downstream 562489 76417946 ~ 76418180 (+)
G438719 NA other upstream 1078784 74772009 ~ 74776469 (+)
LOC110524560 LOC106560270 other upstream 1085087 74729349 ~ 74770168 (+)
G437327 NA other upstream 2360169 73456301 ~ 73495084 (+)
G436588 NA other upstream 2859518 72995499 ~ 72995735 (+)
G441903 NA other downstream 1412755 77268212 ~ 77268766 (+)
G442273 NA other downstream 1702873 77558330 ~ 77583227 (+)
LOC110524622 LOC106560333 other downstream 2390382 78245839 ~ 78288092 (+)
G445204 NA other downstream 4361021 80216478 ~ 80217090 (+)
G445211 NA other downstream 4379423 80234880 ~ 80235428 (+)

Expression


Co-expression Network