G440081



Basic Information


Item Value
gene id G440081
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 75860620 ~ 75860843 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU498233
caataatacagtagataaagtctatatgcagtgtatgcaaatgaggtaagataagggaggtaaggcaataaataggccatggtggcgaagtaattacaatttcaccaattaaacactggagtgatagatgtgcagaagatgaatgtgcaaaaaACTGGGGGgtaaaggagcaagataaataaataaatacagtatggggatgagaggGTTGGATGGGCTAAAAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU498233 True 224 lncRNA 0.38 1 75860620 75860843

Neighbor


gene id symbol gene type direction distance location
LOC110523006 LOC106560358 coding downstream 116911 75740110 ~ 75743709 (-)
rgs8 LOC106560297 coding downstream 154154 75671713 ~ 75706466 (-)
LOC110524580 rgs16 coding downstream 199948 75658532 ~ 75660672 (-)
LOC110524579 LOC106560296 coding downstream 236153 75613590 ~ 75624467 (-)
LOC110524577 LOC106560293 coding downstream 332070 75361138 ~ 75528550 (-)
LOC110524582 LOC106560298 coding upstream 21386 75882229 ~ 75954489 (-)
LOC110524583 LOC106560299 coding upstream 428078 76288921 ~ 76324868 (-)
LOC110524587 uchl5 coding upstream 717400 76578243 ~ 76586678 (-)
glrx2 glrx2 coding upstream 726162 76587005 ~ 76588980 (-)
LOC110524596 barhl2 coding upstream 1131148 76991991 ~ 76996276 (-)
G440043 NA non-coding downstream 23644 75836775 ~ 75836976 (-)
G440040 NA non-coding downstream 25116 75835263 ~ 75835504 (-)
G439931 NA non-coding downstream 98592 75761772 ~ 75762028 (-)
G439929 LOC106581772 non-coding downstream 98912 75761496 ~ 75761708 (-)
G439927 NA non-coding downstream 100419 75759998 ~ 75760201 (-)
G440427 NA non-coding upstream 18799 75879642 ~ 75879954 (-)
G440430 NA non-coding upstream 464077 76324920 ~ 76342414 (-)
G440899 NA non-coding upstream 570256 76431099 ~ 76431450 (-)
G440950 NA non-coding upstream 607869 76468712 ~ 76468961 (-)
G440965 NA non-coding upstream 617981 76478824 ~ 76479026 (-)
G439788 LOC106560295 other downstream 285051 75571249 ~ 75575569 (-)
G439594 NA other downstream 595217 75263473 ~ 75265403 (-)
LOC110523004 NA other downstream 896924 74961377 ~ 74968484 (-)
G439002 NA other downstream 932823 74865259 ~ 74927797 (-)
LOC110524526 LOC106584218 other downstream 2450281 73370439 ~ 73421683 (-)
G441168 glrx2 other upstream 725615 76586458 ~ 76590370 (-)
G441483 NA other upstream 1041539 76902382 ~ 76902771 (-)
G441630 NA other upstream 1153156 77013999 ~ 77021375 (-)
G442115 NA other upstream 1545899 77406742 ~ 77407135 (-)
G442381 rpl5 other upstream 1762456 77623299 ~ 77627214 (-)

Expression



Co-expression Network