G440877


Basic Information

Item Value
gene id G440877
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 76417946 ~ 76418180 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU499066
aatatatgcatattattatagatttggatagaaaacactctgaagtttctaaaactgtttgaatgatgtctgtgagtataacataactcatatggcaggcaaaaacctgagaagaaatccaaacaggaagtgggaaatctgaggtttgtagtttttgaactcagcctctatcgaatacacagtgggatatgggtcattttgcacttcctacggcttccactagatgtcaaccgtc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU499066 True 235 lncRNA 0.37 1 76417946 76418180

Neighbor

gene id symbol gene type direction distance location
LOC118964720 LOC106576333 coding upstream 153412 76262294 ~ 76264534 (+)
rgs4 LOC106560295 coding upstream 845798 75561178 ~ 75572148 (+)
LOC110524576 uhmk1 coding upstream 1070050 75332453 ~ 75347896 (+)
LOC110524571 LOC106560285 coding upstream 1246125 75161317 ~ 75178287 (+)
LOC118964645 LOC106583873 coding upstream 1349201 75061181 ~ 75068745 (+)
LOC110524585 LOC106560359 coding downstream 120812 76538992 ~ 76541623 (+)
LOC110524586 LOC106560300 coding downstream 145309 76563489 ~ 76566464 (+)
LOC110524588 LOC106560302 coding downstream 156194 76574374 ~ 76576547 (+)
LOC110524593 LOC106560306 coding downstream 191789 76609969 ~ 76639478 (+)
LOC110524594 NA coding downstream 229440 76647620 ~ 76656898 (+)
G440856 NA non-coding upstream 12501 76405205 ~ 76405445 (+)
G440795 NA non-coding upstream 53107 76364537 ~ 76364839 (+)
G440409 NA non-coding upstream 99225 76317722 ~ 76318721 (+)
G440102 NA non-coding upstream 543731 75873994 ~ 75874215 (+)
G440071 NA non-coding upstream 562489 75855253 ~ 75855457 (+)
G440893 NA non-coding downstream 10142 76428322 ~ 76428588 (+)
G440929 NA non-coding downstream 33675 76451855 ~ 76452232 (+)
G440930 NA non-coding downstream 34106 76452286 ~ 76452951 (+)
G440931 NA non-coding downstream 34929 76453109 ~ 76453388 (+)
G440951 NA non-coding downstream 51303 76469483 ~ 76469712 (+)
G438719 NA other upstream 1641477 74772009 ~ 74776469 (+)
LOC110524560 LOC106560270 other upstream 1647780 74729349 ~ 74770168 (+)
G437327 NA other upstream 2922862 73456301 ~ 73495084 (+)
G436588 NA other upstream 3422211 72995499 ~ 72995735 (+)
G441903 NA other downstream 850032 77268212 ~ 77268766 (+)
G442273 NA other downstream 1140150 77558330 ~ 77583227 (+)
LOC110524622 LOC106560333 other downstream 1827659 78245839 ~ 78288092 (+)
G445204 NA other downstream 3798298 80216478 ~ 80217090 (+)
G445211 NA other downstream 3816700 80234880 ~ 80235428 (+)

Expression


Co-expression Network