G441765 (LOC106562530)



Basic Information


Item Value
gene id G441765
gene name LOC106562530
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 77154090 ~ 77154391 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU499988
ctcacccggcgtctcgagtccagaatagctcgtaATGTGTACGCcagggacccctcgatgtccagagggggcggagggacctccggtacctcaccttcttgtaggggaccagctaccactggcctgaggagagacacatgaaacgaggggttaatgcgatAGTAAAAGGGAAGTTGCAatctgtaacacacctcgtttatcctcctcaggactttgaatggccccacacactgcggccccagcttccggcagggcaggcggaggggcaggtttcgggtcaagagccagaccctgtcccctgg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU499988 True 302 lncRNA 0.59 1 77154090 77154391

Neighbor


gene id symbol gene type direction distance location
LOC110524596 barhl2 coding downstream 157814 76991991 ~ 76996276 (-)
glrx2 glrx2 coding downstream 565110 76587005 ~ 76588980 (-)
LOC110524587 uchl5 coding downstream 567412 76578243 ~ 76586678 (-)
LOC110524583 LOC106560299 coding downstream 829222 76288921 ~ 76324868 (-)
LOC110524582 LOC106560298 coding downstream 1199601 75882229 ~ 75954489 (-)
LOC110524597 LOC106560308 coding upstream 27523 77181914 ~ 77215911 (-)
LOC110524600 tgfbr3 coding upstream 122514 77276905 ~ 77402910 (-)
LOC110524605 LOC106560313 coding upstream 360727 77515118 ~ 77527861 (-)
LOC110524607 LOC106560317 coding upstream 394469 77548860 ~ 77556868 (-)
LOC110524608 evi5 coding upstream 403931 77558322 ~ 77617711 (-)
G441763 NA non-coding downstream 2347 77151398 ~ 77151743 (-)
G441703 NA non-coding downstream 67701 77086099 ~ 77086389 (-)
G441674 NA non-coding downstream 87907 77065840 ~ 77066183 (-)
G441666 NA non-coding downstream 93751 77060135 ~ 77060339 (-)
G441665 NA non-coding downstream 93957 77056549 ~ 77060133 (-)
G441790 NA non-coding upstream 15059 77169450 ~ 77169810 (-)
G441828 NA non-coding upstream 20120 77174511 ~ 77174889 (-)
G441895 NA non-coding upstream 93879 77248270 ~ 77248498 (-)
G442012 NA non-coding upstream 100792 77255183 ~ 77255532 (-)
G442013 NA non-coding upstream 101335 77255726 ~ 77255976 (-)
G441630 NA other downstream 132715 77013999 ~ 77021375 (-)
G441483 NA other downstream 251319 76902382 ~ 76902771 (-)
G441168 glrx2 other downstream 563720 76586458 ~ 76590370 (-)
G439788 LOC106560295 other downstream 1578521 75571249 ~ 75575569 (-)
G439594 NA other downstream 1888687 75263473 ~ 75265403 (-)
G442115 NA other upstream 252351 77406742 ~ 77407135 (-)
G442381 rpl5 other upstream 468908 77623299 ~ 77627214 (-)
G442807 NA other upstream 927354 78081745 ~ 78082010 (-)
G444001 NA other upstream 1810240 78964631 ~ 78966029 (-)
LOC110524635 LOC106560345 other upstream 2068749 79219153 ~ 79237461 (-)

Expression



Co-expression Network