G441805


Basic Information

Item Value
gene id G441805
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 77189246 ~ 77214515 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU500036
accaacgtacgttcatctctaggagacagaacacgtctccttcctgagtggtatgacggctgcgtggtcccatggtgtttatacttgcgtactattgtttgtacagatgaacgtggtaccttcaggtatttggaaattgctcccaaggatgaaccagacttgtggaggtttacaaatgtttttctgaggactgatttttatttttattttcccataagtttgaaggtaggccttgaaatacatccacaggtaaacctccaattgactcaaattatgtcaattagcctatcagaagcttctaaagccatgacataattttctggaattttccaagctgtttaaaagcacagtcaatttagcgtatgtaaacttctgacccactggaattgtgatacagtgaattataagtgaagtaatcagtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU500036 True 422 lncRNA 0.39 2 77189246 77214515

Neighbor

gene id symbol gene type direction distance location
LOC118964533 NA coding upstream 468114 76716999 ~ 76721132 (+)
LOC110524591 LOC106560304 coding upstream 485109 76693530 ~ 76704137 (+)
LOC110524592 LOC106560305 coding upstream 505211 76663864 ~ 76684035 (+)
LOC110524594 NA coding upstream 532348 76647620 ~ 76656898 (+)
LOC110524593 LOC106560306 coding upstream 549768 76609969 ~ 76639478 (+)
brdt brdt coding downstream 211161 77425676 ~ 77441632 (+)
LOC110524602 ephx4 coding downstream 229466 77443981 ~ 77455616 (+)
LOC110524603 LOC106560312 coding downstream 284626 77499141 ~ 77512420 (+)
LOC110524606 cssa10h1orf146 coding downstream 298209 77512724 ~ 77515120 (+)
LOC110524610 LOC106584167 coding downstream 407769 77622284 ~ 77627211 (+)
G441799 NA non-coding upstream 10569 77173811 ~ 77178677 (+)
G441791 NA non-coding upstream 18996 77170016 ~ 77170250 (+)
G441754 NA non-coding upstream 43177 77145848 ~ 77146069 (+)
G441740 NA non-coding upstream 51544 77137492 ~ 77137702 (+)
G441677 NA non-coding upstream 120364 77068538 ~ 77068882 (+)
G441862 NA non-coding downstream 10272 77224787 ~ 77225030 (+)
G441875 NA non-coding downstream 17776 77232291 ~ 77232529 (+)
G441906 NA non-coding downstream 41218 77255733 ~ 77255973 (+)
G441907 NA non-coding downstream 41500 77256015 ~ 77256248 (+)
G441911 NA non-coding downstream 48069 77262584 ~ 77262879 (+)
LOC110524571 LOC106560285 other upstream 2010959 75161317 ~ 75178287 (+)
G438719 NA other upstream 2412777 74772009 ~ 74776469 (+)
LOC110524560 LOC106560270 other upstream 2419080 74729349 ~ 74770168 (+)
G437327 NA other upstream 3694162 73456301 ~ 73495084 (+)
G436588 NA other upstream 4193511 72995499 ~ 72995735 (+)
G441903 NA other downstream 53697 77268212 ~ 77268766 (+)
G442273 NA other downstream 343815 77558330 ~ 77583227 (+)
LOC110524622 LOC106560333 other downstream 1031324 78245839 ~ 78288092 (+)
G445204 NA other downstream 3001963 80216478 ~ 80217090 (+)
G445211 NA other downstream 3020365 80234880 ~ 80235428 (+)

Expression


Co-expression Network