G442012



Basic Information


Item Value
gene id G442012
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 77255183 ~ 77255532 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU500246
gttctttgcaccccatcattgtgaggtattgtttgttttgtgataCACTTCTATTCGGAGCTCTGTTTTCCTGTAATTTAATCCTCCTGTGTTTCGCCTGCCTAACTAACGacaccttttgcctattccctgcctgtactttagcctttcagatttcctgttatcaacttATTGCTTGATCTCCCTGatgacgttactagccttttccctgcctgtactgttgcctttttggaccccctgtgtatgaccttctgcctgcccctggacccagctacctgcctcctcctgtggtcatttaccaataaacacctgctgtgccctgcgcttgaaaccagctctctgtctcccat

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU500246 True 350 lncRNA 0.47 1 77255183 77255532

Neighbor


gene id symbol gene type direction distance location
LOC110524597 LOC106560308 coding downstream 39272 77181914 ~ 77215911 (-)
LOC110524596 barhl2 coding downstream 258907 76991991 ~ 76996276 (-)
glrx2 glrx2 coding downstream 666203 76587005 ~ 76588980 (-)
LOC110524587 uchl5 coding downstream 668505 76578243 ~ 76586678 (-)
LOC110524583 LOC106560299 coding downstream 930315 76288921 ~ 76324868 (-)
LOC110524600 tgfbr3 coding upstream 21373 77276905 ~ 77402910 (-)
LOC110524605 LOC106560313 coding upstream 259586 77515118 ~ 77527861 (-)
LOC110524607 LOC106560317 coding upstream 293328 77548860 ~ 77556868 (-)
LOC110524608 evi5 coding upstream 302790 77558322 ~ 77617711 (-)
LOC110524609 fam69a coding upstream 371925 77627457 ~ 77642149 (-)
G441895 NA non-coding downstream 6685 77248270 ~ 77248498 (-)
G441828 NA non-coding downstream 80294 77174511 ~ 77174889 (-)
G441790 NA non-coding downstream 85373 77169450 ~ 77169810 (-)
G441765 LOC106562530 non-coding downstream 100792 77154090 ~ 77154391 (-)
G441763 NA non-coding downstream 103440 77151398 ~ 77151743 (-)
G442013 NA non-coding upstream 194 77255726 ~ 77255976 (-)
G442021 NA non-coding upstream 14328 77269860 ~ 77272749 (-)
G442022 NA non-coding upstream 17436 77272968 ~ 77273997 (-)
G442023 NA non-coding upstream 20313 77275845 ~ 77276048 (-)
G442030 NA non-coding upstream 33032 77288564 ~ 77288787 (-)
G441630 NA other downstream 233808 77013999 ~ 77021375 (-)
G441483 NA other downstream 352412 76902382 ~ 76902771 (-)
G441168 glrx2 other downstream 664813 76586458 ~ 76590370 (-)
G439788 LOC106560295 other downstream 1679614 75571249 ~ 75575569 (-)
G439594 NA other downstream 1989780 75263473 ~ 75265403 (-)
G442115 NA other upstream 151210 77406742 ~ 77407135 (-)
G442381 rpl5 other upstream 367767 77623299 ~ 77627214 (-)
G442807 NA other upstream 826213 78081745 ~ 78082010 (-)
G444001 NA other upstream 1709099 78964631 ~ 78966029 (-)
LOC110524635 LOC106560345 other upstream 1967608 79219153 ~ 79237461 (-)

Expression



Co-expression Network