Item | Value |
---|---|
gene id | G442022 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048569.1 |
NCBI id | CM023223.2 |
chromosome length | 100798064 |
location | 77272968 ~ 77273997 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
Transposable element Tcb1 transposase, partial |
id | description |
---|
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU500259 | True | 1030 | lncRNA | 0.39 | 1 | 77272968 | 77273997 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110524597 | LOC106560308 | coding | downstream | 57057 | 77181914 ~ 77215911 (-) |
LOC110524596 | barhl2 | coding | downstream | 276692 | 76991991 ~ 76996276 (-) |
glrx2 | glrx2 | coding | downstream | 683988 | 76587005 ~ 76588980 (-) |
LOC110524587 | uchl5 | coding | downstream | 686290 | 76578243 ~ 76586678 (-) |
LOC110524583 | LOC106560299 | coding | downstream | 948100 | 76288921 ~ 76324868 (-) |
LOC110524600 | tgfbr3 | coding | upstream | 2908 | 77276905 ~ 77402910 (-) |
LOC110524605 | LOC106560313 | coding | upstream | 241121 | 77515118 ~ 77527861 (-) |
LOC110524607 | LOC106560317 | coding | upstream | 274863 | 77548860 ~ 77556868 (-) |
LOC110524608 | evi5 | coding | upstream | 284325 | 77558322 ~ 77617711 (-) |
LOC110524609 | fam69a | coding | upstream | 353460 | 77627457 ~ 77642149 (-) |
G442021 | NA | non-coding | downstream | 219 | 77269860 ~ 77272749 (-) |
G442013 | NA | non-coding | downstream | 16992 | 77255726 ~ 77255976 (-) |
G442012 | NA | non-coding | downstream | 17436 | 77255183 ~ 77255532 (-) |
G441895 | NA | non-coding | downstream | 24470 | 77248270 ~ 77248498 (-) |
G441828 | NA | non-coding | downstream | 98079 | 77174511 ~ 77174889 (-) |
G442023 | NA | non-coding | upstream | 1848 | 77275845 ~ 77276048 (-) |
G442030 | NA | non-coding | upstream | 14567 | 77288564 ~ 77288787 (-) |
G442032 | NA | non-coding | upstream | 17246 | 77291243 ~ 77291489 (-) |
G442034 | NA | non-coding | upstream | 19210 | 77293207 ~ 77293417 (-) |
G442035 | NA | non-coding | upstream | 19802 | 77293799 ~ 77333276 (-) |
G441630 | NA | other | downstream | 251593 | 77013999 ~ 77021375 (-) |
G441483 | NA | other | downstream | 370197 | 76902382 ~ 76902771 (-) |
G441168 | glrx2 | other | downstream | 682598 | 76586458 ~ 76590370 (-) |
G439788 | LOC106560295 | other | downstream | 1697399 | 75571249 ~ 75575569 (-) |
G439594 | NA | other | downstream | 2007565 | 75263473 ~ 75265403 (-) |
G442115 | NA | other | upstream | 132745 | 77406742 ~ 77407135 (-) |
G442381 | rpl5 | other | upstream | 349302 | 77623299 ~ 77627214 (-) |
G442807 | NA | other | upstream | 807748 | 78081745 ~ 78082010 (-) |
G444001 | NA | other | upstream | 1690634 | 78964631 ~ 78966029 (-) |
LOC110524635 | LOC106560345 | other | upstream | 1949143 | 79219153 ~ 79237461 (-) |