G442115



Basic Information


Item Value
gene id G442115
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 77406742 ~ 77407135 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU500354
TCAAACTTACCAATAGTGCTTTGAATAACCACAAAATACATGAGCATTTGTCTGACAATACAGTACTGAAATGACAACAGAAGGATGAGGAAAAAATTGTTGGCCTTGTCTTTGTATGAATCAGGAGGAGTGCTATTTAGAAACAGCCACACGAGGGCAGTATTACCTACATTATGTGTGGTGCAGAAACTCCTCTGCCGAAGGCTAACTGGAAAACTGACGTGCAAGGACCATGCATTTAATATACTGTTAGTTTCCATAAATTATTTGACAGCCACAGTGTTTTGGTCACTGCTCGTGTGTTTACTGTTTCTGTTAACTTGTGGATGTCTATATTCTGTTTGCATATTTTGTCTGTTGCCGGCAGCAACACTTCACTGAGTTAAAATCCGGG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU500354 True 394 TUCP 0.40 1 77406742 77407135

Neighbor


gene id symbol gene type direction distance location
LOC110524600 tgfbr3 coding downstream 3832 77276905 ~ 77402910 (-)
LOC110524597 LOC106560308 coding downstream 190831 77181914 ~ 77215911 (-)
LOC110524596 barhl2 coding downstream 410466 76991991 ~ 76996276 (-)
glrx2 glrx2 coding downstream 817762 76587005 ~ 76588980 (-)
LOC110524587 uchl5 coding downstream 820064 76578243 ~ 76586678 (-)
LOC110524605 LOC106560313 coding upstream 107983 77515118 ~ 77527861 (-)
LOC110524607 LOC106560317 coding upstream 141725 77548860 ~ 77556868 (-)
LOC110524608 evi5 coding upstream 151187 77558322 ~ 77617711 (-)
LOC110524609 fam69a coding upstream 220322 77627457 ~ 77642149 (-)
gadd45ab LOC106560326 coding upstream 464630 77871765 ~ 77874843 (-)
G442096 NA non-coding downstream 20908 77385617 ~ 77385834 (-)
G442087 NA non-coding downstream 32973 77373523 ~ 77373769 (-)
G442078 NA non-coding downstream 51096 77355415 ~ 77355646 (-)
G442068 NA non-coding downstream 63992 77342517 ~ 77342750 (-)
G442035 NA non-coding downstream 73466 77293799 ~ 77333276 (-)
G442116 NA non-coding upstream 3152 77410287 ~ 77410653 (-)
G442137 NA non-coding upstream 15085 77422220 ~ 77422477 (-)
G442141 NA non-coding upstream 16217 77423352 ~ 77423695 (-)
G442173 NA non-coding upstream 47777 77454912 ~ 77455575 (-)
G442191 NA non-coding upstream 62483 77469618 ~ 77469838 (-)
G441630 NA other downstream 385367 77013999 ~ 77021375 (-)
G441483 NA other downstream 503971 76902382 ~ 76902771 (-)
G441168 glrx2 other downstream 816372 76586458 ~ 76590370 (-)
G439788 LOC106560295 other downstream 1831173 75571249 ~ 75575569 (-)
G439594 NA other downstream 2141339 75263473 ~ 75265403 (-)
G442381 rpl5 other upstream 216164 77623299 ~ 77627214 (-)
G442807 NA other upstream 674610 78081745 ~ 78082010 (-)
G444001 NA other upstream 1557496 78964631 ~ 78966029 (-)
LOC110524635 LOC106560345 other upstream 1816005 79219153 ~ 79237461 (-)
G444691 LOC106605670 other upstream 2323852 79730987 ~ 79731536 (-)

Expression



Co-expression Network