G442488



Basic Information


Item Value
gene id G442488
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 77731824 ~ 77732396 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU500771
actcagcaaactggatgcagtttatcacagtgccatccgttttgttaccaaatcaccttataccacccaccactgcgacctgtatgctctagtcggctggccatcgctacatattcgtcgccagacccactggctccaggtcatctataagtctatgctaggtaaagctctgccttatctcagttcactggtcacgataacaacacccacccgtagcacacgttccagcaggtatatctcactgatcatccctaaagccaacacctaatttggccgcctttccttccagttctctgctgccagtgactggaacgaattgcaaaaatcgctgaagttggagacttttatttccctcaccaactttaaacatcaactatctgagcagctaaccgatcgctgcagctgtacatagtccatctgtaaataacccacccaatctacctacctcatccccatactgtttttatttgatttacttttctgctcatttgcacaccagtatctctacttgcacatcatcatctgctcatttatcactccagtgttaatctgctatatTGAAATTAtttgctc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU500771 True 573 lncRNA 0.45 1 77731824 77732396

Neighbor


gene id symbol gene type direction distance location
LOC110524609 fam69a coding downstream 89675 77627457 ~ 77642149 (-)
LOC110524608 evi5 coding downstream 114113 77558322 ~ 77617711 (-)
LOC110524607 LOC106560317 coding downstream 174956 77548860 ~ 77556868 (-)
LOC110524605 LOC106560313 coding downstream 203963 77515118 ~ 77527861 (-)
LOC110524600 tgfbr3 coding downstream 328914 77276905 ~ 77402910 (-)
gadd45ab LOC106560326 coding upstream 139369 77871765 ~ 77874843 (-)
znf648 LOC106560330 coding upstream 192819 77914925 ~ 77939001 (-)
glulb LOC106560331 coding upstream 251348 77983744 ~ 77987655 (-)
LOC110524621 med8 coding upstream 507372 78239768 ~ 78245830 (-)
hyi hyi coding upstream 650609 78383005 ~ 78387067 (-)
G442475 NA non-coding downstream 24566 77707000 ~ 77707258 (-)
G442461 NA non-coding downstream 39926 77691670 ~ 77691898 (-)
G442458 NA non-coding downstream 44138 77687385 ~ 77687686 (-)
G442381 rpl5 non-coding downstream 104610 77623299 ~ 77627214 (-)
G442620 NA non-coding upstream 26426 77758822 ~ 77833545 (-)
G442643 NA non-coding upstream 134892 77867288 ~ 77868657 (-)
G442644 NA non-coding upstream 137972 77870368 ~ 77871055 (-)
G442649 NA non-coding upstream 148829 77881225 ~ 77881951 (-)
G442666 NA non-coding upstream 169386 77901782 ~ 77902328 (-)
G442115 NA other downstream 324689 77406742 ~ 77407135 (-)
G441630 NA other downstream 710449 77013999 ~ 77021375 (-)
G441483 NA other downstream 829053 76902382 ~ 76902771 (-)
G441168 glrx2 other downstream 1141454 76586458 ~ 76590370 (-)
G442807 NA other upstream 349349 78081745 ~ 78082010 (-)
G444001 NA other upstream 1232235 78964631 ~ 78966029 (-)
LOC110524635 LOC106560345 other upstream 1490744 79219153 ~ 79237461 (-)
G444691 LOC106605670 other upstream 1998591 79730987 ~ 79731536 (-)
G445115 NA other upstream 2250065 79982461 ~ 79987704 (-)

Expression



Co-expression Network