XLOC_023565


Basic Information

Item Value
gene id XLOC_023565
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 31709501 ~ 31717481 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00047221
CCAAAGAGCAGCTTTCTGAATGACGGAGCAGATGCAGAACTTACAGCATCACAAATGATATCGAGACGGGAGAGTTATATGGAGCGGCAGAAGAAAAGAGGAATCGCAACCTCTTCAGTCTCTCTGAGAAGATCGAGAGATGCAGAGGAAGAGAAACAGGCGCAGATGGCTGCTAAAATGTGATTCCGTGACGTTTTTCTCCGTGGGCTCTCCGCTGAGAGAGCGGAGCGGAGCGCGCATGCGCAGAAGGGAGAGGTATGGTTGAAAACTCGCAGTCCATCGCGCCGAGCAGAAGAGGAGCAGCACAACTAAATGTGACTTATcagagcatcatcatcatcacatctGCGCCTCCGGGAGACAAAGAGACGAGACGAACTGTAAAGGAGCAAACAACGCGATCCCAGCCTCCCGGAGTGATATGatatcacaattattattatatctcTCGACGTGACGACTGTTTGTCTGCCTCAAATGTTTCCAACCCACTGAGACCGGGGGGGATTTATTCCTTCTTTTgttctttgcttttttttattgactATAAATAAAAGCAGCCAAAACGAATAAATACGGGTCATTATGGTTTTGTTAACACTGCATAACAGAAGAGGCTTGAATTGCTTGTGCGCGCAGTTCTTGCTGTGGATATTATGTGCGGTGGACGGAGAGGAGCAGCAATTCAGTGTGGAGGTAAGAGAGATCCACAGACGAGATGATGCTGATGTCCTTCACGTCTACTGTATATTGGCCACATAAACATTGAGCC

Function

GO:

id name namespace
GO:1903522 regulation of blood circulation biological_process
GO:0008016 regulation of heart contraction biological_process
GO:0048666 neuron development biological_process
GO:0003015 heart process biological_process
GO:0007399 nervous system development biological_process
GO:0030427 site of polarized growth cellular_component
GO:0044295 axonal growth cone cellular_component

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00047221 True 772 lncRNA 0.47 2 31709501 31717481

Neighbor

gene id symbol gene type direction distance location
XLOC_023564 CABZ01029420.1 coding downstream 69074 31640312 ~ 31640427 (-)
XLOC_023563 NA coding downstream 251307 31455086 ~ 31458194 (-)
XLOC_023562 cngb3.2 coding downstream 256578 31430890 ~ 31452923 (-)
XLOC_023561 cngb3.1 coding downstream 283702 31402894 ~ 31425799 (-)
XLOC_023560 abcd3a coding downstream 377414 31310640 ~ 31332087 (-)
XLOC_023566 NA coding upstream 37766 31755247 ~ 31756351 (-)
XLOC_023567 CT737162.3 coding upstream 68982 31786463 ~ 31786577 (-)
XLOC_023568 steap2 coding upstream 114977 31832458 ~ 31846366 (-)
XLOC_023569 si:ch73-78o10.1 coding upstream 179243 31896724 ~ 31905000 (-)
XLOC_023570 c1ql3a coding upstream 223023 31940504 ~ 31942686 (-)
XLOC_023665 dre-mir-735 misc upstream 6460480 38177961 ~ 38178027 (-)
XLOC_023554 NA non-coding downstream 628068 31040020 ~ 31081433 (-)
XLOC_023553 NA non-coding downstream 736638 30927688 ~ 30972863 (-)
XLOC_023552 NA non-coding downstream 797636 30903443 ~ 30911865 (-)
XLOC_023574 NA non-coding upstream 644952 32362433 ~ 32363362 (-)
XLOC_023575 NA non-coding upstream 689413 32406894 ~ 32408404 (-)
XLOC_023581 NA non-coding upstream 989960 32707441 ~ 33221175 (-)

Expression


Co-expression Network