XLOC_023566


Basic Information

Item Value
gene id XLOC_023566
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 31755247 ~ 31756351 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00047222
TGTAAACAGTCATGGCTAAGATGAAGGAGCTCAGTGAAGACCTTTGGCTGCGCCAGTAATGCCATTGAAAAATTATTGCTTCAGGCACCATTTAAGCACCAGTTCCATTTTACCAACGTATCTATCTGGCAGTGAGTCCAGTGTTGCCCAGTGACCTAGTGAACCCTACAACATTACCCAAACATTTGAAATTCATTGACACCAAACATCCGTCCTCAGGAGGAAATTGAAAGCTCATCGCAAAGGAAACTCTGGTTGAAACTGGACTTCTGTAGGATTCCTAGAAAACAGGGTAGAGGTGAAGGAAATGGGCCGGCTGGGATTTCCTCGATGCCAACAGGGGGAGCTGCACATTCTACCTTCTAAATTGATTCCAGCCTTAAAAAGCAAAGGAAATGCCATTCCTCATGCTGGATCCTTTTGTCTGGGTAAAACATCCTATACTATTGTTCTGTCTGAAGTTTTAAACTGAAACACCTGCCAGAGGCCCCTTCGGACCGAGCGTCTGCTTTCACTATACGTTTTTTCCTCTCAAGTAATTAGAGAAAGCCTTTTGGCCTGCAAAACTGGGGCAGTGTTTAGCAGAAATGGTCTAGTTTTCAAATTAGAGGACAAGAGTAAGGTTTAGAGATGCACTTTTTGGAAAAGAAAATCGACTACTTTTAACTTCAAGAAGACCATGTTGTGCGCAAGATGGTGAAAACGCAGAATACACATACGCAAACACATCAAGTTGATggaaaattgcttttttttttgtttacttattttgg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00047222 True 773 lncRNA 0.42 2 31755247 31756351

Neighbor

gene id symbol gene type direction distance location
XLOC_023565 NA coding downstream 37766 31709501 ~ 31717481 (-)
XLOC_023564 CABZ01029420.1 coding downstream 114820 31640312 ~ 31640427 (-)
XLOC_023563 NA coding downstream 297053 31455086 ~ 31458194 (-)
XLOC_023562 cngb3.2 coding downstream 302324 31430890 ~ 31452923 (-)
XLOC_023561 cngb3.1 coding downstream 329448 31402894 ~ 31425799 (-)
XLOC_023567 CT737162.3 coding upstream 30112 31786463 ~ 31786577 (-)
XLOC_023568 steap2 coding upstream 76107 31832458 ~ 31846366 (-)
XLOC_023569 si:ch73-78o10.1 coding upstream 140373 31896724 ~ 31905000 (-)
XLOC_023570 c1ql3a coding upstream 184153 31940504 ~ 31942686 (-)
XLOC_023571 rsu1 coding upstream 195982 31952333 ~ 32025637 (-)
XLOC_023665 dre-mir-735 misc upstream 6421610 38177961 ~ 38178027 (-)
XLOC_023554 NA non-coding downstream 673814 31040020 ~ 31081433 (-)
XLOC_023553 NA non-coding downstream 782384 30927688 ~ 30972863 (-)
XLOC_023574 NA non-coding upstream 606082 32362433 ~ 32363362 (-)
XLOC_023575 NA non-coding upstream 650543 32406894 ~ 32408404 (-)
XLOC_023581 NA non-coding upstream 951090 32707441 ~ 33221175 (-)
XLOC_023587 NA non-coding upstream 1793511 33549862 ~ 33670492 (-)

Expression


Co-expression Network